RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 SRSF1Q07955 248 aaKnown RBP eCLIP15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 Q8N9W7 124 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 ANAPC16Q96DE5 110 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 PERPQ96FX8 193 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 FAM106CPP0CH98 169 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 PSG1P11464 419 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 PAX8Q06710 450 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 CLEC2AQ6UVW9 174 aa15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 RBM14Q96PK6 669 aaKnown RBP15.51■□□□□ 0.07
CHRNA4-209ENST00000627000 A0A1W2PRE2 83 aa15.5■□□□□ 0.07
CHRNA4-209ENST00000627000 ZNF600Q6ZNG1 722 aa15.5■□□□□ 0.07
CHRNA4-209ENST00000627000 FXYD5Q96DB9 178 aa15.5■□□□□ 0.07
CHRNA4-209ENST00000627000 FANCD2OSQ96PS1 177 aa15.5■□□□□ 0.07
CHRNA4-209ENST00000627000 CRYBG3Q68DQ2 2970 aa15.5■□□□□ 0.07
CHRNA4-209ENST00000627000 TRBV24-1A0A075B6N3 115 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 IGHV7-81A0A0B4J1V7 117 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 HYPMO75409 117 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 IGKV1-17P01599 117 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 EGR2P11161 476 aaPredicted RBP15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 NDUFA6P56556 154 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 DEFA6Q01524 100 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 LEMD1Q68G75 181 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 OR5B12Q96R08 314 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 RASL11BQ9BPW5 248 aa15.49■□□□□ 0.07
CHRNA4-209ENST00000627000 ZFHX3Q15911 3703 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 NPIPB5A8MRT5 1133 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 K7EN84 100 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 NDUFS8O00217 210 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 TRGC2P03986 189 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 LYZP61626 148 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 HSPB9Q9BQS6 159 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 IGLV11-55A0A075B6I3 123 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 BRS3P32247 399 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 PLP1P60201 277 aa15.48■□□□□ 0.07
CHRNA4-209ENST00000627000 A1L4Q6 167 aa15.47■□□□□ 0.07
CHRNA4-209ENST00000627000 HELTA6NFD8 242 aa15.47■□□□□ 0.07
CHRNA4-209ENST00000627000 TTC9CQ8N5M4 171 aa15.47■□□□□ 0.07
CHRNA4-209ENST00000627000 OR1L6Q8NGR2 347 aa15.47■□□□□ 0.07
CHRNA4-209ENST00000627000 SFRP2Q96HF1 295 aa15.47■□□□□ 0.07
CHRNA4-209ENST00000627000 C9JCJ5 164 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 PPP1R2P9O14990 202 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 PYGO2Q9BRQ0 406 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 C1RLQ9NZP8 487 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 MDFIC2A0A1B0GVS7 189 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 A0A1W2PPQ1 181 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 SH2D7A6NKC9 451 aaPredicted RBP15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 CENPWQ5EE01 88 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 BRD3OSQ6XYD6 125 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 BLNKQ8WV28 456 aa15.46■□□□□ 0.07
CHRNA4-209ENST00000627000 TRAV40A0A0B4J280 105 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 RD3LP0DJH9 198 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 CD99P14209 185 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 FAM3BP58499 235 aaPredicted RBP15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 SSTP61278 116 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 TEX38Q6PEX7 206 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 HIGD1AQ9Y241 93 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 CELSR1Q9NYQ6 3014 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 HLA-DRB1P01911 266 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 ZNF329Q86UD4 541 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 LINC00479Q96M42 142 aa15.45■□□□□ 0.06
CHRNA4-209ENST00000627000 H3BTX0 84 aa15.44■□□□□ 0.06
CHRNA4-209ENST00000627000 OR5I1Q13606 314 aa15.44■□□□□ 0.06
CHRNA4-209ENST00000627000 PYY3Q5JQD4 70 aa15.44■□□□□ 0.06
CHRNA4-209ENST00000627000 CSMD2Q7Z408 3487 aa15.44■□□□□ 0.06
CHRNA4-209ENST00000627000 IGHV1-69DA0A0B4J2H0 117 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 NDUFB8O95169 186 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 IGHV1-69P01742 117 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 IGHV3-23P01764 117 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 GP9P14770 177 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 GNG4P50150 75 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 RANP62826 216 aaKnown RBP15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 F8W735 103 aaPredicted RBP15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 OR2J3O76001 311 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 SRP14P37108 136 aaKnown RBP15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 STXBP6Q8NFX7 210 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 SLC25A39Q9BZJ4 359 aaPredicted RBP15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 SOX21Q9Y651 276 aaPredicted RBP15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 FAM208BQ5VWN6 2430 aa15.43■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BKO60814 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 GGCTO75223 188 aaKnown RBP15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BJP06899 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 IGHV4-38-2P0DP08 117 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BOP23527 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BBP33778 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BDP58876 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BCP62807 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST2H2BEQ16778 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 TMEM219Q86XT9 240 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 OR10G8Q8NGN5 311 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 FRZBQ92765 325 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BHQ93079 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BNQ99877 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 HIST1H2BMQ99879 126 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 MRPL27Q9P0M9 148 aaKnown RBP15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 LY96Q9Y6Y9 160 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 EPG5Q9HCE0 2579 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 A0A0U1RQK1 487 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 LINC01548A6NM66 108 aa15.42■□□□□ 0.06
CHRNA4-209ENST00000627000 PHOX2AO14813 284 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms