RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 RTL8CO15255 209 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 GABARAPO95166 117 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 DEFB1P60022 68 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 GPR107Q5VW38 600 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 FAT2Q9NYQ8 4349 aa13.58□□□□□ -0.24
SMN1-211ENST00000625245 DNAH2Q9P225 4427 aa13.57□□□□□ -0.24
SMN1-211ENST00000625245 DISC1C4P0D8 188 aa13.57□□□□□ -0.24
SMN1-211ENST00000625245 IFNA21P01568 189 aa13.57□□□□□ -0.24
SMN1-211ENST00000625245 NKX2-1P43699 371 aaPredicted RBP13.57□□□□□ -0.24
SMN1-211ENST00000625245 ZNF705AQ6ZN79 300 aaPredicted RBP13.57□□□□□ -0.24
SMN1-211ENST00000625245 RNF125Q96EQ8 232 aa13.57□□□□□ -0.24
SMN1-211ENST00000625245 NEU1Q99519 415 aa13.57□□□□□ -0.24
SMN1-211ENST00000625245 IGLV2-18A0A075B6J9 118 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 TMEM189A5PLL7 270 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 CRYM-AS1A6NIL9 109 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 RGS5O15539 181 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 SULT1A3P0DMM9 295 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 SULT1A4P0DMN0 295 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 OR4B1Q8NGF8 309 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 PFDN2Q9UHV9 154 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
SMN1-211ENST00000625245 SMIM9A6NGZ8 99 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 ZNF705FA8MVS1 300 aaPredicted RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 ZNF705DP0CH99 300 aaPredicted RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 ZNF705BP0CI00 300 aaPredicted RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 ID1P41134 155 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 SSBP1Q04837 148 aaKnown RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 KLF9Q13886 244 aaPredicted RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 SURF2Q15527 256 aaPredicted RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 CTF1Q16619 201 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 NMSQ5H8A3 153 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 WDR12Q9GZL7 423 aaKnown RBP13.55□□□□□ -0.24
SMN1-211ENST00000625245 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 PRR13Q9NZ81 148 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 RFNGQ9Y644 331 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 TMEM56-RWDD3S4R434 201 aa13.55□□□□□ -0.24
SMN1-211ENST00000625245 PKHD1P08F94 4074 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 ZFP92A6NM28 416 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 HTN3P15516 51 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 NUP62P37198 522 aaPredicted RBP13.54□□□□□ -0.24
SMN1-211ENST00000625245 LGALS9BQ3B8N2 356 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 GSG1LQ6UXU4 331 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 LGI3Q8N145 548 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 COQ8AQ8NI60 647 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
SMN1-211ENST00000625245 CACFD1Q9UGQ2 172 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 KCNIP3Q9Y2W7 256 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 U3KQ87 197 aa13.54□□□□□ -0.24
SMN1-211ENST00000625245 AKAIN1P0CW23 69 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 MRPS10P82664 201 aaKnown RBP13.53□□□□□ -0.24
SMN1-211ENST00000625245 ZNF90Q03938 601 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 FAM222AQ5U5X8 452 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 FOXI2Q6ZQN5 318 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 OR4C16Q8NGL9 310 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 DTD1Q8TEA8 209 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 PPP1R14BQ96C90 147 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 NIPSNAP3BQ9BS92 247 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 RBKSQ9H477 322 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 DKK2Q9UBU2 259 aa13.53□□□□□ -0.24
SMN1-211ENST00000625245 CTDSP2O14595 271 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 LYZP61626 148 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 OR8G2PQ6IF36 304 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 OR51S1Q8NGJ8 323 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 SLC35E1Q96K37 410 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 FAM210BQ96KR6 192 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 PRRT1Q99946 306 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 C7orf50Q9BRJ6 194 aaKnown RBP13.52□□□□□ -0.25
SMN1-211ENST00000625245 SLC35B3Q9H1N7 401 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 GOLT1BQ9Y3E0 138 aa13.52□□□□□ -0.25
SMN1-211ENST00000625245 PSMB3P49720 205 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 CCR6P51684 374 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 OR2F1Q13607 317 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 GAMTQ14353 236 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 SMCO1Q147U7 214 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 CLVS1Q8IUQ0 354 aaPredicted RBP13.51□□□□□ -0.25
SMN1-211ENST00000625245 ZNF709Q8N972 641 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 SMIM4Q8WVI0 70 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 IL22RA2Q969J5 263 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 HSPB7Q9UBY9 170 aa13.51□□□□□ -0.25
SMN1-211ENST00000625245 TEX48A0A1B0GUV7 120 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 F6UB75 175 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 SUPT4H1P63272 117 aaKnown RBP13.5□□□□□ -0.25
SMN1-211ENST00000625245 PSG9Q00887 426 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 IL18Q14116 193 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 EBLN2Q6P2I7 272 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 LYZL2Q7Z4W2 148 aa13.5□□□□□ -0.25
SMN1-211ENST00000625245 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 LOC102723971A0A1B0GUV8 181 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 SNRPGP15A8MWD9 76 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 HBE1P02100 147 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 FABP1P07148 127 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 AKR1C4P17516 323 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
SMN1-211ENST00000625245 FAM78BQ5VT40 261 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 OR8I2Q8N0Y5 310 aa13.49□□□□□ -0.25
SMN1-211ENST00000625245 OR1S1Q8NH92 325 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms