RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 STAG3L3P0CL85 134 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 TAGLN2P37802 199 aaKnown RBP9.15□□□□□ -0.94
LINC00963-220ENST00000625171 ATP5G2Q06055 141 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 FOXE3Q13461 319 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 C9orf152Q5JTZ5 239 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 S100A7AQ86SG5 101 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 MYOZ3Q8TDC0 251 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 EEF1AKMT3Q96AZ1 226 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 SCRT1Q9BWW7 348 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 C16orf95Q9H693 158 aa9.15□□□□□ -0.94
LINC00963-220ENST00000625171 MRPL27Q9P0M9 148 aaKnown RBP9.15□□□□□ -0.94
LINC00963-220ENST00000625171 RD3LP0DJH9 198 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 CDC34P49427 236 aaPredicted RBP9.14□□□□□ -0.95
LINC00963-220ENST00000625171 PSMB3P49720 205 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 PPT1P50897 306 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 RAB9AP51151 201 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 ELLP55199 621 aaPredicted RBP9.14□□□□□ -0.95
LINC00963-220ENST00000625171 SLC35B1P78383 322 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF90Q03938 601 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF616Q08AN1 781 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF343Q6P1L6 599 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 TEX38Q6PEX7 206 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 SLC7A5P1Q8MH63 180 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 OR51G1Q8NGK1 321 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 PCNPQ8WW12 178 aaKnown RBP9.14□□□□□ -0.95
LINC00963-220ENST00000625171 TMEM37Q8WXS4 190 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 FAM210AQ96ND0 272 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 HRH4Q9H3N8 390 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 SERTAD4Q9NUC0 356 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 RNF24Q9Y225 148 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 FUT9Q9Y231 359 aa9.14□□□□□ -0.95
LINC00963-220ENST00000625171 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.13□□□□□ -0.95
LINC00963-220ENST00000625171 TRGV3P03979 118 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 CD5P06127 495 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 PSG1P11464 419 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 S100A7P31151 101 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 KIAA0141Q14154 515 aaPredicted RBP9.13□□□□□ -0.95
LINC00963-220ENST00000625171 PATE2Q6UY27 113 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 COMMD7Q86VX2 200 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF491Q8N8L2 437 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 WIPF2Q8TF74 440 aaPredicted RBP9.13□□□□□ -0.95
LINC00963-220ENST00000625171 Q8WTZ3 238 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
LINC00963-220ENST00000625171 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 PBDC1Q9BVG4 233 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 SEPSECSQ9HD40 501 aaKnown RBP9.13□□□□□ -0.95
LINC00963-220ENST00000625171 ESM1Q9NQ30 184 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF355PQ9NSJ1 428 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 ARL2-SNX15V9GYD0 113 aa9.13□□□□□ -0.95
LINC00963-220ENST00000625171 MAP1LC3B2A6NCE7 125 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 HAX1O00165 279 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 NUPL2O15504 423 aaKnown RBP9.12□□□□□ -0.95
LINC00963-220ENST00000625171 HYPMO75409 117 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 NDUFA7O95182 113 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 CXorf1O96002 111 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 IGHV3-48P01763 117 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 CLEC3BP05452 202 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 S100A1P23297 94 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 ADMP35318 185 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 TAS2R45P59539 299 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 TIGITQ495A1 244 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 Q56UQ5 140 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 GCSAMLQ5JQS6 135 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF600Q6ZNG1 722 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 Q6ZSV7 163 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 TMEM190Q8WZ59 177 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 MAP1LC3BQ9GZQ8 125 aa9.12□□□□□ -0.95
LINC00963-220ENST00000625171 IGHV3-21A0A0B4J1V1 117 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 ANKRD34BA5PLL1 514 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 FAM181BA6NEQ2 426 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 C8orf88P0DMB2 117 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 GATA2P23769 480 aaPredicted RBP9.11□□□□□ -0.95
LINC00963-220ENST00000625171 CCL20P78556 96 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 RELQ04864 619 aaPredicted RBP9.11□□□□□ -0.95
LINC00963-220ENST00000625171 KHDC3LQ587J8 217 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 FAM78BQ5VT40 261 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 C10orf113Q5VZT2 155 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 FAM122CQ6P4D5 195 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 SSX7Q7RTT5 188 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF414Q96IQ9 312 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 UBE2E2Q96LR5 201 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 TECRQ9NZ01 308 aaKnown RBP9.11□□□□□ -0.95
LINC00963-220ENST00000625171 LINC00527Q9UJ94 153 aa9.11□□□□□ -0.95
LINC00963-220ENST00000625171 KRBOX1C9JBD0 128 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 TGOLN2O43493 480 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 COX7A2P2O60397 106 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 ATP6V1G1O75348 118 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 PF4V1P10720 104 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 TPPP2P59282 170 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 PEA15Q15121 130 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 KRTAP24-1Q3LI83 254 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 LCN15Q6UWW0 184 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 RNF125Q96EQ8 232 aa9.1□□□□□ -0.95
LINC00963-220ENST00000625171 FAM167A-AS1Q96KT0 104 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms