RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 SMIM4Q8WVI0 70 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 ACY3Q96HD9 319 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 C17orf77Q96MU5 243 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 RNF126Q9BV68 326 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 WDR12Q9GZL7 423 aaKnown RBP6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 RBKSQ9H477 322 aa6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 C14orf166Q9Y224 244 aaKnown RBP6.53□□□□□ -1.36
PCDHB9-202ENST00000623266 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 ANKRD20A5PA0PJZ0 165 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 DISC1C4P0D8 188 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 RGS5O15539 181 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 NPY1RP25929 384 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 KLF9Q13886 244 aaPredicted RBP6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 GAMTQ14353 236 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF705AQ6ZN79 300 aaPredicted RBP6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 NARS2Q96I59 477 aaKnown RBP6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 NRN1Q9NPD7 142 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 HSPB7Q9UBY9 170 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 KCNIP3Q9Y2W7 256 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 U3KQ87 197 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 RYR1P21817 5038 aa6.52□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF705FA8MVS1 300 aaPredicted RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 RTL8CO15255 209 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 PITX3O75364 302 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 IFNA10P01566 189 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF705DP0CH99 300 aaPredicted RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF705BP0CI00 300 aaPredicted RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 SULT1A3P0DMM9 295 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 SULT1A4P0DMN0 295 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 HLA-DRB4P13762 266 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 GPX4P36969 197 aaPredicted RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 FXYD7P58549 80 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 MRPS10P82664 201 aaKnown RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 ETFRF1Q6IPR1 90 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 CLVS1Q8IUQ0 354 aaPredicted RBP6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 POM121L12Q8N7R1 296 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 DYNC2LI1Q8TCX1 351 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 IL22RA2Q969J5 263 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 DIRAS2Q96HU8 199 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 NEU1Q99519 415 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 HLA-DRB4X5D2U9 266 aa6.51□□□□□ -1.37
PCDHB9-202ENST00000623266 MUC4Q99102 2169 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 IGKV1OR2-108A0A075B7D4 117 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 A0A0B4J2A0 478 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 M0R2N4 97 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 SOCS3O14543 225 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 GSTZ1O43708 216 aaPredicted RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 IGKV3-20P01619 116 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 AKR1C4P17516 323 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 TNFSF8P32971 234 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 NKX2-1P43699 371 aaPredicted RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 EIF2B2P49770 351 aaKnown RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 CCR6P51684 374 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 SNRPD3P62318 126 aaKnown RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 SMCO1Q147U7 214 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 TMEM182Q6ZP80 229 aaPredicted RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 LGI3Q8N145 548 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 C1orf158Q8N1D5 194 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF709Q8N972 641 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 DTD1Q8TEA8 209 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 RNF125Q96EQ8 232 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 C1QTNF4Q9BXJ3 329 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 SAV1Q9H4B6 383 aaPredicted RBP6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 SHPKQ9UHJ6 478 aa6.5□□□□□ -1.37
PCDHB9-202ENST00000623266 NACAE9PAV3 2078 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 F6UB75 175 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 SCGB2A1O75556 95 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 AMBPP02760 352 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 PRM2P04554 102 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 NUTF2P61970 127 aaKnown RBP6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 IL18Q14116 193 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 NOXA1Q86UR1 476 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 LINC00052Q96N35 136 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 PRRT1Q99946 306 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 DKK2Q9UBU2 259 aa6.49□□□□□ -1.37
PCDHB9-202ENST00000623266 SMIM9A6NGZ8 99 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 SNRPGP15A8MWD9 76 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 PRSS46E5RG02 174 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 SPART-AS1P0CW21 52 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 P0DMU3 169 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 FAM231CP0DMU5 169 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 EMP1P54849 157 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 PAX9P55771 341 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 ATP5IP56385 69 aaPredicted RBP6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 OR2F1Q13607 317 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 ZNF79Q15937 498 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 FAM78BQ5VT40 261 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 GPR141Q7Z602 305 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 NDUFAF3Q9BU61 184 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 PBDC1Q9BVG4 233 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 SLIRPQ9GZT3 109 aaKnown RBP6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 CACFD1Q9UGQ2 172 aa6.48□□□□□ -1.37
PCDHB9-202ENST00000623266 SCP2D1Q9UJQ7 156 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms