RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 SAP25Q8TEE9 199 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 SDK2Q58EX2 2172 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 FREM2Q5SZK8 3169 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 CT45A10P0DMU9 189 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 PPIFP30405 207 aaKnown RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 ZNF137PP52743 207 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 C16orf47Q6ZP98 133 aaPredicted RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 Q6ZR03 302 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.48□□□□□ -1.37
VPS11-209ENST00000622309 PRELID3AQ96N28 172 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 OXGR1Q96P68 337 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 ZNF747Q9BV97 191 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 AP5S1Q9NUS5 200 aa6.48□□□□□ -1.37
VPS11-209ENST00000622309 CACNA1BQ00975 2339 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 A0A1W2PNR3 127 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 E9PLD3 99 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 NCR2O95944 276 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 ZNF146Q15072 292 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 DRAM1Q8N682 238 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 C8orf46Q8TAG6 207 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.47□□□□□ -1.37
VPS11-209ENST00000622309 PRDX2P32119 198 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 FGF12P61328 243 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 PLP2Q04941 152 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 DEFB133Q30KQ1 61 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 FOXL2NBQ6ZUU3 175 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 PCP2Q8IVA1 136 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 MKXQ8IYA7 352 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 TMEM178AQ8NBL3 297 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 UBALD1Q8TB05 177 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 C18orf15Q96N68 181 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 GVINP1Q7Z2Y8 2422 aa6.47□□□□□ -1.37
VPS11-209ENST00000622309 TRAV5A0A0B4J249 113 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 IGLL5B9A064 214 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 J3QLI3 93 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 MT-CO3P00414 261 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 IGLV2-14P01704 120 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 GFERP55789 205 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 ERVK11-1P61568 191 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 CR1LQ2VPA4 569 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 TMEM42Q69YG0 159 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 Q6AWC8 147 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 C20orf204Q6ZNR8 217 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 MIR17HGQ75NE6 70 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 CACNA1DQ01668 2161 aa6.46□□□□□ -1.37
VPS11-209ENST00000622309 IGHV3-20A0A0C4DH32 117 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 SPTY2D1-AS1A0A0U1RR47 76 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 FABP5P3A8MUU1 101 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 TIMM8AO60220 97 aaPredicted RBP6.46□□□□□ -1.38
VPS11-209ENST00000622309 FAM231DQ6ZW35 169 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 PRSS3P2Q8NHM4 247 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 IGF2BP2-AS1Q96M15 143 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 COL4A2P08572 1712 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 THADAQ6YHU6 1953 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 APOHP02749 345 aaPredicted RBP6.46□□□□□ -1.38
VPS11-209ENST00000622309 CA6P23280 308 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 DAZAP2Q15038 168 aaPredicted RBP6.46□□□□□ -1.38
VPS11-209ENST00000622309 TTC32Q5I0X7 151 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 TMEM131Q92545 1883 aa6.46□□□□□ -1.38
VPS11-209ENST00000622309 LOC107984640A0A0U1RRK4 108 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 A0A1W2PQM1 296 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 MBD3L4A6NDZ8 208 aaPredicted RBP6.45□□□□□ -1.38
VPS11-209ENST00000622309 MBD3L3A6NE82 208 aaPredicted RBP6.45□□□□□ -1.38
VPS11-209ENST00000622309 MBD3L5A6NJ08 208 aaPredicted RBP6.45□□□□□ -1.38
VPS11-209ENST00000622309 ZIC3O60481 467 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 RETNQ9HD89 108 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 ESPL1Q14674 2120 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 KMT2BQ9UMN6 2715 aaPredicted RBP6.45□□□□□ -1.38
VPS11-209ENST00000622309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 IGKV3-11P04433 115 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 CACNG7P62955 275 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 IL17DQ8TAD2 202 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 PGLYRP4Q96LB8 373 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 HS3ST6Q96QI5 342 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 FAM234AQ9H0X4 552 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 FSCN3Q9NQT6 498 aa6.45□□□□□ -1.38
VPS11-209ENST00000622309 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
VPS11-209ENST00000622309 TRBV20-1A0A075B6N2 111 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 GGTLC3B5MD39 225 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.44□□□□□ -1.38
VPS11-209ENST00000622309 ADORA2A-AS1P86434 159 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 C4orf48Q5BLP8 95 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 ATP6V0E2Q8NHE4 81 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 LINC00479Q96M42 142 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 CHAC1Q9BUX1 264 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 SIT1Q9Y3P8 196 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 TCRBV4S1A1TA0A5B7 111 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 MGST3O14880 152 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 RS1O15537 224 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 GAGE2BQ13066 116 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 LGALS9BQ3B8N2 356 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 GAGE2EQ4V326 116 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 LGALS9CQ6DKI2 356 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 LCNL1Q6ZST4 164 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 FAM214BQ7L5A3 538 aa6.44□□□□□ -1.38
VPS11-209ENST00000622309 HSD17B10Q99714 261 aaKnown RBP6.44□□□□□ -1.38
VPS11-209ENST00000622309 GAGE2DQ9UEU5 116 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms