RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, human

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM3A-222	ENST00000621967	DSCR9	P59020	149 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	TAS2R60	P59551	318 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	PAFAH1B2	P68402	229 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967		Q0VG73	95 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	VMA21	Q3ZAQ7	101 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	PVRIG	Q6DKI7	326 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	PATE2	Q6UY27	113 aa		13.96	□□□□□ -0.17
FAM3A-222	ENST00000621967	VPS13C	Q709C8	3753 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967		A0A1W2PPI3	338 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	SNURFL	B1AK76	121 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	MT-ND6	P03923	174 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	IGHV1-8	P0DP01	117 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	COX19	Q49B96	90 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	C10orf113	Q5VZT2	155 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	C11orf42	Q8N5U0	333 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	NPIPB3	Q92617	1050 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	MS4A10	Q96PG2	267 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	BPESC1	Q9GZL8	116 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	ZNF355P	Q9NSJ1	428 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	CDC42EP3	Q9UKI2	254 aa		13.96	□□□□□ -0.18
FAM3A-222	ENST00000621967	SLC25A17	O43808	307 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	COX7A2P2	O60397	106 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	LGALS7	P47929	136 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	BPIFB3	P59826	476 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	RPL19	P84098	196 aa	Known RBP	13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	LBH	Q53QV2	105 aa	Predicted RBP	13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	WDR73	Q6P4I2	378 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	TPSG1	Q9NRR2	321 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	MRPL36	Q9P0J6	103 aa	Known RBP	13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	NAGK	Q9UJ70	344 aa		13.95	□□□□□ -0.18
FAM3A-222	ENST00000621967	CRYGC	P07315	174 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	TPPP2	P59282	170 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967		Q5PR19	223 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	IBA57	Q5T440	356 aa	Known RBP	13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	C10orf105	Q8TEF2	133 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	PAXX	Q9BUH6	204 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	SMIM27	A0A1W2PRY6	76 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	SERF1A	O75920	110 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	RAN	P62826	216 aa	Known RBP	13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	FXYD3	Q14802	87 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	TMEM136	Q6ZRR5	245 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	RITA1	Q96K30	269 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	TMEM133	Q9H2Q1	129 aa		13.94	□□□□□ -0.18
FAM3A-222	ENST00000621967	IGLC7	A0M8Q6	106 aa		13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	SCGB1D1	O95968	90 aa		13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	PYY	P10082	97 aa		13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	ZNF329	Q86UD4	541 aa		13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	TNFRSF14	Q92956	283 aa		13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.93	□□□□□ -0.18
FAM3A-222	ENST00000621967	KIR2DL5B	A0A0G2JN68	375 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	KIR2DL5B	A0A0G2JPC4	375 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	C1orf194	Q5T5A4	169 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967		Q6ZWC4	215 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	KIR2DL5A	Q8N109	375 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	TEX45	Q8NA69	505 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	FXYD5	Q96DB9	178 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	C2orf88	Q9BSF0	95 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	CCDC168	Q8NDH2	2452 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	IGHV4-30-2	A0A087WSY4	118 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	MYCNOS	P40205	109 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	ETFRF1	Q6IPR1	90 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	FAM231D	Q6ZW35	169 aa		13.92	□□□□□ -0.18
FAM3A-222	ENST00000621967	NOTCH2	Q04721	2471 aa		13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967	PDZD2	O15018	2839 aa		13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967	C22orf46	C9J442	243 aa		13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967	CRYGB	P07316	175 aa		13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967	MGST1	P10620	155 aa	Known RBP	13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967	ZNF600	Q6ZNG1	722 aa		13.91	□□□□□ -0.18
FAM3A-222	ENST00000621967		F2Z2F3	143 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	PEX7	O00628	323 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	IGLV1-47	P01700	117 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	IGHV3-48	P01763	117 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	AMY1A	P04745	511 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	REG1A	P05451	166 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	SLC25A16	P16260	332 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	PAX2	Q02962	417 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	PRSS57	Q6UWY2	283 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	NAT8B	Q9UHF3	227 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	MAP1A	P78559	2803 aa	Predicted RBP	13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	MFAP2	P55001	183 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	OR10J3	Q5JRS4	329 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	LINC00305	Q7Z4B0	112 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	BAGE3	Q86Y29	109 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	BAGE2	Q86Y30	109 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	OR8B3	Q8NGG8	313 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	LINC00479	Q96M42	142 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	OR8B2	Q96RD0	313 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	TRGV9	Q99603	122 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	FOXC2	Q99958	501 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967	GNB4	Q9HAV0	340 aa		13.9	□□□□□ -0.18
FAM3A-222	ENST00000621967		A0A1B0GV90	55 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	IZUMO1R	A6ND01	250 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	VWC2L	B2RUY7	222 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	HLA-DQA1	P01909	254 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	RPL27A	P46776	148 aa	Known RBP	13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	TCL1A	P56279	114 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	RUSC1-AS1	Q66K80	236 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	TNFRSF19	Q9NS68	423 aa		13.89	□□□□□ -0.19
FAM3A-222	ENST00000621967	IGHV2-26	A0A0B4J1V2	119 aa		13.88	□□□□□ -0.19

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