RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 ACTR3CQ9C0K3 210 aaPredicted RBP8.25□□□□□ -1.09
CPNE3-212ENST00000621783 HRH4Q9H3N8 390 aa8.25□□□□□ -1.09
CPNE3-212ENST00000621783 GNB4Q9HAV0 340 aa8.25□□□□□ -1.09
CPNE3-212ENST00000621783 HIVEP2P31629 2446 aa8.25□□□□□ -1.09
CPNE3-212ENST00000621783 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.24□□□□□ -1.09
CPNE3-212ENST00000621783 A0A1B0GV50 99 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 MAP1LC3B2A6NCE7 125 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 PPP5D1E7EU14 171 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 HMGB3O15347 200 aaKnown RBP8.24□□□□□ -1.09
CPNE3-212ENST00000621783 TRBV12-3P01733 135 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 CLEC3BP05452 202 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 OR5G3P0C626 314 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 RD3LP0DJH9 198 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 PLP1P60201 277 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 RHOBP62745 196 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 KIAA0141Q14154 515 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-212ENST00000621783 SPATA31B1PQ5VZV4 182 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 ZNF343Q6P1L6 599 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 SPSB3Q6PJ21 355 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 LCN15Q6UWW0 184 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 ZNF600Q6ZNG1 722 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 OR4X2Q8NGF9 303 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 OR1L4Q8NGR5 311 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 LINC01006Q8NI28 216 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 RAB24Q969Q5 203 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 PFDN5Q99471 154 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 MAP1LC3BQ9GZQ8 125 aa8.24□□□□□ -1.09
CPNE3-212ENST00000621783 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 WI2-2373I1.2A0A1W2PRP0 233 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 OR2C1O95371 312 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 HBE1P02100 147 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 ORM2P19652 201 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 ARL3P36405 182 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 FGF8P55075 233 aaPredicted RBP8.23□□□□□ -1.09
CPNE3-212ENST00000621783 NDUFA5Q16718 116 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 FAM78BQ5VT40 261 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 C10orf113Q5VZT2 155 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 PATE2Q6UY27 113 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 MIR17HGQ75NE6 70 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 COMMD7Q86VX2 200 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 OR5AU1Q8NGC0 362 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 OR4F5Q8NH21 305 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 LYPD6BQ8NI32 183 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 WIPF2Q8TF74 440 aaPredicted RBP8.23□□□□□ -1.09
CPNE3-212ENST00000621783 Q8WTZ3 238 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 GATAD1Q8WUU5 269 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 SFT2D1Q8WV19 159 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 MBD3L1Q8WWY6 194 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 RNF125Q96EQ8 232 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 OR5B12Q96R08 314 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 RNF2Q99496 336 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 PBDC1Q9BVG4 233 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 MRPL32Q9BYC8 188 aaKnown RBP8.23□□□□□ -1.09
CPNE3-212ENST00000621783 SEPSECSQ9HD40 501 aaKnown RBP8.23□□□□□ -1.09
CPNE3-212ENST00000621783 PFDN2Q9UHV9 154 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 FUT9Q9Y231 359 aa8.23□□□□□ -1.09
CPNE3-212ENST00000621783 PUS1Q9Y606 427 aaKnown RBP eCLIP8.23□□□□□ -1.09
CPNE3-212ENST00000621783 ELOA3CA0A087WX78 387 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-212ENST00000621783 TRAV1-1A0A0B4J248 108 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 IGHV3-35A0A0C4DH35 117 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 ANKRD34BA5PLL1 514 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 HYPMO75409 117 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 IL4P05112 153 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 LGALS1P09382 135 aaKnown RBP8.22□□□□□ -1.09
CPNE3-212ENST00000621783 RELQ04864 619 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-212ENST00000621783 USF2Q15853 346 aaPredicted RBP8.22□□□□□ -1.09
CPNE3-212ENST00000621783 TCTEX1D4Q5JR98 221 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 FAM209BQ5JX69 171 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 MORN5Q5VZ52 161 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 SLC7A5P1Q8MH63 180 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 C19orf24Q9BVV8 132 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 DNAJC4Q9NNZ3 241 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 MED9Q9NWA0 146 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 HIGD1AQ9Y241 93 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 HIVEP1P15822 2718 aa8.22□□□□□ -1.09
CPNE3-212ENST00000621783 BMPR1BO00238 502 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 STAG3L2P0CL84 134 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 STAG3L3P0CL85 134 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 ARL14EPLP0DKL9 152 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 CCL20P78556 96 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 TOMM20LQ6UXN7 152 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 IL34Q6ZMJ4 242 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 C18orf65Q6ZTR6 163 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 LINC00305Q7Z4B0 112 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 SCRT1Q9BWW7 348 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 SLC25A2Q9BXI2 301 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 TECRQ9NZ01 308 aaKnown RBP8.21□□□□□ -1.1
CPNE3-212ENST00000621783 MRPL27Q9P0M9 148 aaKnown RBP8.21□□□□□ -1.1
CPNE3-212ENST00000621783 PEF1Q9UBV8 284 aaKnown RBP8.21□□□□□ -1.1
CPNE3-212ENST00000621783 RNF114Q9Y508 228 aa8.21□□□□□ -1.1
CPNE3-212ENST00000621783 FLNBO75369 2602 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms