RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 MEF2BQ02080 365 aaPredicted RBP8.3□□□□□ -1.08
VPS11-208ENST00000621676 DEFB136Q30KP8 78 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 LINC00311Q8N616 119 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 PARLQ9H300 379 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 SAV1Q9H4B6 383 aaPredicted RBP8.3□□□□□ -1.08
VPS11-208ENST00000621676 YAE1D1Q9NRH1 226 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 A0A1W2PPQ1 181 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 M0R1W7 72 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 CD5P06127 495 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 SERF2P84101 59 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 DEFB113Q30KQ7 82 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 CCDC144NLQ6NUI1 221 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 C1orf122Q6ZSJ8 110 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 TMEM144Q7Z5S9 345 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 MGAM2Q2M2H8 2515 aa8.3□□□□□ -1.08
VPS11-208ENST00000621676 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 OR2C1O95371 312 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 ZNF137PP52743 207 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 TPPP2P59282 170 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 PATE2Q6UY27 113 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 HOXA3O43365 443 aaPredicted RBP8.29□□□□□ -1.08
VPS11-208ENST00000621676 TRGV3P03979 118 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 RAB5CP51148 216 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 PAX2Q02962 417 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 ATP6V1FQ16864 119 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 C16orf82Q7Z2V1 217 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 TEX45Q8NA69 505 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 SNAPINO95295 136 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 RHOBP62745 196 aa8.29□□□□□ -1.08
VPS11-208ENST00000621676 A0A087X0M5 115 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 A0A1B0GX30 115 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 PGPA6NDG6 321 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 ITGB1BP1O14713 200 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 GCHFRP30047 84 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 PARD6GQ9BYG4 376 aaPredicted RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 CLEC5AQ9NY25 188 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 MLXQ9UH92 298 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 TIMM8BQ9Y5J9 83 aaPredicted RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 F11RQ9Y624 299 aaKnown RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 PIGBOS1A0A0B4J2F0 54 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 IGKV3-20P01619 116 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 HBE1P02100 147 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 RNF212Q495C1 297 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 LINC00518Q8N0U6 118 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 OR8I2Q8N0Y5 310 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 OR52E5Q8NH55 327 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 MALSU1Q96EH3 234 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 SLC45A2Q9UMX9 530 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 ZNF257Q9Y2Q1 563 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 FBN1P35555 2871 aaKnown RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 IGKV1D-37A0A075B6S9 117 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 ODF3BA8MYP8 253 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 DNASE2O00115 360 aaPredicted RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 SPRY2O43597 315 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 C2orf83Q53S99 150 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 RBMS3Q6XE24 437 aaKnown RBP8.28□□□□□ -1.08
VPS11-208ENST00000621676 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 NCOR1P1Q9H4R4 102 aa8.28□□□□□ -1.08
VPS11-208ENST00000621676 LOC102723971A0A1B0GUV8 181 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 SLC25A5P05141 298 aaKnown RBP8.27□□□□□ -1.09
VPS11-208ENST00000621676 CTAG1AP78358 180 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 C8orf46Q8TAG6 207 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 PAXXQ9BUH6 204 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 RNASE7Q9H1E1 156 aaKnown RBP8.27□□□□□ -1.09
VPS11-208ENST00000621676 VAX2Q9UIW0 290 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 ZNF705FA8MVS1 300 aaPredicted RBP8.27□□□□□ -1.09
VPS11-208ENST00000621676 K7EIM0 57 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 APOHP02749 345 aaPredicted RBP8.27□□□□□ -1.09
VPS11-208ENST00000621676 FRMD6-AS1P0C7T7 363 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 RPL35P42766 123 aaKnown RBP8.27□□□□□ -1.09
VPS11-208ENST00000621676 GLMPQ8WWB7 406 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 FRZBQ92765 325 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 FANCD2OSQ96PS1 177 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 C21orf62Q9NYP8 219 aa8.27□□□□□ -1.09
VPS11-208ENST00000621676 IGKV1-17P01599 117 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 RAB4BP61018 213 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 USF2Q15853 346 aaPredicted RBP8.26□□□□□ -1.09
VPS11-208ENST00000621676 ZNF562Q6V9R5 426 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 AJUBAQ96IF1 538 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 LSM4Q9Y4Z0 139 aaKnown RBP8.26□□□□□ -1.09
VPS11-208ENST00000621676 KLF2Q9Y5W3 355 aaPredicted RBP8.26□□□□□ -1.09
VPS11-208ENST00000621676 HYPMO75409 117 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 CRYBA1P05813 215 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 PAX8Q06710 450 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 RNF182Q8N6D2 247 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 NSD1Q96L73 2696 aaPredicted RBP8.26□□□□□ -1.09
VPS11-208ENST00000621676 IFNA1P01562 189 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 ZNF503Q96F45 646 aa8.26□□□□□ -1.09
VPS11-208ENST00000621676 PSMG3Q9BT73 122 aaPredicted RBP8.26□□□□□ -1.09
VPS11-208ENST00000621676 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 FAM90A2PQ658T7 463 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 C1QL4Q86Z23 238 aa8.25□□□□□ -1.09
VPS11-208ENST00000621676 LINC01356Q8N9X3 169 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms