RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 RD3LP0DJH9 198 aa10.76□□□□□ -0.69
CBWD3-217ENST00000621474 PVALBP20472 110 aaPredicted RBP10.76□□□□□ -0.69
CBWD3-217ENST00000621474 BCAP31P51572 246 aa10.76□□□□□ -0.69
CBWD3-217ENST00000621474 ST8SIA2Q92186 375 aa10.76□□□□□ -0.69
CBWD3-217ENST00000621474 GINS3Q9BRX5 216 aa10.76□□□□□ -0.69
CBWD3-217ENST00000621474 VSIRQ9H7M9 311 aa10.76□□□□□ -0.69
CBWD3-217ENST00000621474 SULT1A1P50225 295 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 AKR1C1Q04828 323 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 Q8N1Y9 231 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 TMEM217Q8N7C4 229 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 OR51G1Q8NGK1 321 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 MRAPQ8TCY5 172 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 Q8WTZ3 238 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 MED28Q9H204 178 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 U3KQE9 123 aa10.75□□□□□ -0.69
CBWD3-217ENST00000621474 E5RGE8 158 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 GATA2P23769 480 aaPredicted RBP10.74□□□□□ -0.69
CBWD3-217ENST00000621474 NHLH2Q02577 135 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 STPG3Q8N7X2 389 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 RNF125Q96EQ8 232 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 GGACTQ9BVM4 153 aa10.74□□□□□ -0.69
CBWD3-217ENST00000621474 DNAH9Q9NYC9 4486 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 SMCO3A2RU48 225 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 NPPCP23582 126 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 P2RY1P47900 373 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 SLC38A11Q08AI6 406 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 OR2F1Q13607 317 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 VWC2Q2TAL6 325 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 METTL26Q96S19 204 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 NPVFQ9HCQ7 196 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 TSPAN4O14817 238 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 RLN2P04090 185 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 CD7P09564 240 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 LYL1P12980 280 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 EWSR1Q01844 656 aaKnown RBP eCLIP10.73□□□□□ -0.69
CBWD3-217ENST00000621474 MBD2Q9UBB5 411 aa10.73□□□□□ -0.69
CBWD3-217ENST00000621474 TRAV25A0A0B4J276 109 aa10.72□□□□□ -0.69
CBWD3-217ENST00000621474 Q5BKY6 102 aa10.72□□□□□ -0.69
CBWD3-217ENST00000621474 TEPPQ6URK8 271 aa10.72□□□□□ -0.69
CBWD3-217ENST00000621474 STX12Q86Y82 276 aa10.72□□□□□ -0.69
CBWD3-217ENST00000621474 BUB3O43684 328 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 DFFBO76075 338 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 HNRNPCP07910 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
CBWD3-217ENST00000621474 PET100P0DJ07 73 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 S100A11P31949 105 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 LYZP61626 148 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 GUCA2BQ16661 112 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 RBPMS2Q6ZRY4 209 aaKnown RBP10.71□□□□□ -0.69
CBWD3-217ENST00000621474 CYP2G1PQ6ZSU1 146 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 MGST2Q99735 147 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 PBDC1Q9BVG4 233 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 C19orf73Q9NVV2 129 aa10.71□□□□□ -0.69
CBWD3-217ENST00000621474 G3V3Q6 166 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 GIPP09681 153 aaPredicted RBP10.7□□□□□ -0.7
CBWD3-217ENST00000621474 OR5C1Q8NGR4 320 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 CHAC2Q8WUX2 184 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 GLMPQ8WWB7 406 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 SPAG8Q99932 426 aaPredicted RBP10.7□□□□□ -0.7
CBWD3-217ENST00000621474 WFDC10AQ9H1F0 79 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 UQCC1Q9NVA1 299 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 RABAC1Q9UI14 185 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
CBWD3-217ENST00000621474 AGPAT2O15120 278 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 FABP1P07148 127 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 EIF2B2P49770 351 aaKnown RBP10.69□□□□□ -0.7
CBWD3-217ENST00000621474 CD81P60033 236 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 HBG1P69891 147 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 HBG2P69892 147 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 C16orf54Q6UWD8 224 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 TCF24Q7RTU0 167 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 TMEM147Q9BVK8 224 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 IGKV3-7A0A075B6H7 116 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 A0A1W2PS18 150 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 PLP1P60201 277 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 BAXQ07812 192 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 DEFB121Q5J5C9 76 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 LAMTOR1Q6IAA8 161 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 GTSCR1Q86UQ5 136 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 BPIFCQ8NFQ6 507 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 NEURL2Q9BR09 285 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 SLC25A31Q9H0C2 315 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 SLC45A2Q9UMX9 530 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 SMAD5-AS1Q9Y6J3 95 aa10.69□□□□□ -0.7
CBWD3-217ENST00000621474 TGP01266 2768 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 UBE2L5PA0A1B0GUS4 154 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 CFDP00746 253 aaPredicted RBP10.68□□□□□ -0.7
CBWD3-217ENST00000621474 LINC00869P0C866 280 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 IGHV4-30-4P0DP06 118 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 SELENOTP62341 195 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 ODF3L2Q3SX64 289 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 ASB13Q8WXK3 278 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 GGTLC1Q9BX51 225 aa10.68□□□□□ -0.7
CBWD3-217ENST00000621474 COL7A1Q02388 2944 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
CBWD3-217ENST00000621474 CD5P06127 495 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 ORM2P19652 201 aa10.67□□□□□ -0.7
CBWD3-217ENST00000621474 RPL12P30050 165 aaKnown RBP10.67□□□□□ -0.7
CBWD3-217ENST00000621474 BMI1P35226 326 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms