RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 FBLN7Q53RD9 439 aa15.74■□□□□ 0.11
PDLIM3-212ENST00000620787 GAL3ST2Q9H3Q3 398 aa15.74■□□□□ 0.11
PDLIM3-212ENST00000620787 RPH3ALQ9UNE2 315 aa15.74■□□□□ 0.11
PDLIM3-212ENST00000620787 C22orf46C9J442 243 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 SUB1P53999 127 aaKnown RBP eCLIP15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 RUSC1-AS1Q66K80 236 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 ZCCHC24Q8N2G6 241 aaKnown RBP15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 CHCHD1Q96BP2 118 aaKnown RBP15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 PERPQ96FX8 193 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 ST20Q9HBF5 79 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 C19orf71A6NCJ1 209 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 SYS1-DBNDD2H3BUS1 97 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 IGLV2-23P01705 113 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 CCL3L1P16619 93 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 C3orf36Q3SXR2 165 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 CT83Q5H943 113 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 LHFPL4Q7Z7J7 247 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 STXBP6Q8NFX7 210 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 OR4C13Q8NGP0 309 aa15.73■□□□□ 0.11
PDLIM3-212ENST00000620787 A8MWL6 223 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 ORM2P19652 201 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 DIAPH2-AS1Q14236 149 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 VSTM2AQ8TAG5 236 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 ZNF492Q9P255 531 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 SOX21Q9Y651 276 aaPredicted RBP15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 LTAP01374 205 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 PGLYRP4Q96LB8 373 aa15.72■□□□□ 0.11
PDLIM3-212ENST00000620787 OR1B1Q8NGR6 318 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 C22orf15Q8WYQ4 148 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 PLXNB1O43157 2135 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 A0A1W2PPI3 338 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 hDV102S1A0JD36 115 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 FCN3O75636 299 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 P01737 135 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 NBEAP1P0C6P0 100 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 SP9P0CG40 484 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 MPV17L2Q567V2 206 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 LRRC10Q5BKY1 277 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 FMC1Q96HJ9 113 aa15.71■□□□□ 0.11
PDLIM3-212ENST00000620787 LEPROTL1O95214 131 aa15.7■□□□□ 0.1
PDLIM3-212ENST00000620787 TPSG1Q9NRR2 321 aa15.7■□□□□ 0.1
PDLIM3-212ENST00000620787 MEF2CQ06413 473 aaPredicted RBP15.7■□□□□ 0.1
PDLIM3-212ENST00000620787 C5orf17Q8NAS9 161 aa15.7■□□□□ 0.1
PDLIM3-212ENST00000620787 CRYGCP07315 174 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 GP9P14770 177 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 MRGPRG-AS1Q2M3A8 158 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 RBPMS2Q6ZRY4 209 aaKnown RBP15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 RPRMLQ8N4K4 120 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 LOXL4Q96JB6 756 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 GFRA4Q9GZZ7 299 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 ZFHX4Q86UP3 3567 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 ZNF137PP52743 207 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 TMEM200BQ69YZ2 307 aa15.69■□□□□ 0.1
PDLIM3-212ENST00000620787 LOC102724200A0A096LPH7 203 aaPredicted RBP15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 TCRAP04437 139 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 C22orf34Q6ZV56 151 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 OR4C5Q8NGB2 326 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 OR10X1Q8NGY0 326 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 TRGV9Q99603 122 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 WASHC3Q9Y3C0 194 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 TRAV30A0A087WSZ9 112 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 H3BTX0 84 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 TAX1BP3O14907 124 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 SLC25A17O43808 307 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 CDKN1BP46527 198 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 Q9H3A6 140 aa15.68■□□□□ 0.1
PDLIM3-212ENST00000620787 CEACAM8P31997 349 aaPredicted RBP15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 FAM71F2Q6NXP2 309 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 RITA1Q96K30 269 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 NDFIP1Q9BT67 221 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 TMEM191AQ9H0A3 160 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 FAM215AQ9Y5M1 114 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 FAM87AP0C7U9 286 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 CCL8P80075 99 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 ANKRD39Q53RE8 183 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 BVES-AS1Q5T3Y7 98 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 PVRIGQ6DKI7 326 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 SLC25A34Q6PIV7 304 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 ERASQ7Z444 233 aa15.67■□□□□ 0.1
PDLIM3-212ENST00000620787 NPIPB6E9PJ23 425 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 NUDT3O95989 172 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 RHOGP84095 191 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 VAMP3Q15836 100 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 ETFRF1Q6IPR1 90 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 HCP5Q6MZN7 132 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 DEFB123Q8N688 67 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 TMEM186Q96B77 213 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 SCRT2Q9NQ03 307 aa15.66■□□□□ 0.1
PDLIM3-212ENST00000620787 LIPFP07098 398 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 DAZAP1Q96EP5 407 aaKnown RBP15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 FAM231BA6NCW3 169 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 CHEK1O14757 476 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 APOHP02749 345 aaPredicted RBP15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 OR5AL1P0C617 328 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 VMA21Q3ZAQ7 101 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 Q86TA4 180 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 LINC00311Q8N616 119 aa15.65■□□□□ 0.1
PDLIM3-212ENST00000620787 OVOL3O00110 214 aa15.64■□□□□ 0.09
PDLIM3-212ENST00000620787 CD40P25942 277 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms