RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 NRN1Q9NPD7 142 aa2.56□□□□□ -2
LPP-221ENST00000618621 TCF20Q9UGU0 1960 aaKnown RBP2.56□□□□□ -2
LPP-221ENST00000618621 TMSB15BA0A087X1C1 80 aa2.56□□□□□ -2
LPP-221ENST00000618621 RBFOX2O43251 390 aaKnown RBP eCLIP2.56□□□□□ -2
LPP-221ENST00000618621 MEF2CQ06413 473 aaPredicted RBP2.56□□□□□ -2
LPP-221ENST00000618621 RFNGQ9Y644 331 aa2.56□□□□□ -2
LPP-221ENST00000618621 TMEM78Q5T7P6 136 aa2.56□□□□□ -2
LPP-221ENST00000618621 APOHP02749 345 aaPredicted RBP2.56□□□□□ -2
LPP-221ENST00000618621 ANOS1P23352 680 aa2.56□□□□□ -2
LPP-221ENST00000618621 SNRPD3P62318 126 aaKnown RBP2.56□□□□□ -2
LPP-221ENST00000618621 CCL8P80075 99 aa2.56□□□□□ -2
LPP-221ENST00000618621 SHISA2Q6UWI4 295 aa2.56□□□□□ -2
LPP-221ENST00000618621 Q6ZT83 130 aa2.56□□□□□ -2
LPP-221ENST00000618621 SMPXQ9UHP9 88 aa2.56□□□□□ -2
LPP-221ENST00000618621 ZNF257Q9Y2Q1 563 aa2.56□□□□□ -2
LPP-221ENST00000618621 RFPL3SP0C7P2 107 aa2.55□□□□□ -2
LPP-221ENST00000618621 LHFPL1Q86WI0 220 aa2.55□□□□□ -2
LPP-221ENST00000618621 COQ2Q96H96 371 aa2.55□□□□□ -2
LPP-221ENST00000618621 SLC25A2Q9BXI2 301 aa2.55□□□□□ -2
LPP-221ENST00000618621 WNT10AQ9GZT5 417 aa2.55□□□□□ -2
LPP-221ENST00000618621 HILPDAQ9Y5L2 63 aa2.55□□□□□ -2
LPP-221ENST00000618621 PAPPAQ13219 1627 aa2.55□□□□□ -2
LPP-221ENST00000618621 IGHV3-21A0A0B4J1V1 117 aa2.55□□□□□ -2
LPP-221ENST00000618621 RHODO00212 210 aa2.55□□□□□ -2
LPP-221ENST00000618621 CCL21O00585 134 aa2.55□□□□□ -2
LPP-221ENST00000618621 ESDP10768 282 aa2.55□□□□□ -2
LPP-221ENST00000618621 CDCP2Q5VXM1 449 aa2.55□□□□□ -2
LPP-221ENST00000618621 ZNF503Q96F45 646 aa2.55□□□□□ -2
LPP-221ENST00000618621 NABP2Q9BQ15 211 aa2.55□□□□□ -2
LPP-221ENST00000618621 ANAPC10Q9UM13 185 aa2.55□□□□□ -2
LPP-221ENST00000618621 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
LPP-221ENST00000618621 MIR17HGQ75NE6 70 aa2.55□□□□□ -2
LPP-221ENST00000618621 DDB2Q92466 427 aa2.55□□□□□ -2
LPP-221ENST00000618621 TRGV9Q99603 122 aa2.55□□□□□ -2
LPP-221ENST00000618621 GRIFINA4D1Z8 144 aa2.55□□□□□ -2
LPP-221ENST00000618621 TEX43Q6ZNM6 134 aa2.55□□□□□ -2
LPP-221ENST00000618621 RNF144BQ7Z419 303 aa2.55□□□□□ -2
LPP-221ENST00000618621 SIGLEC12Q96PQ1 595 aa2.55□□□□□ -2
LPP-221ENST00000618621 LSM4Q9Y4Z0 139 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 IGKV1-12A0A0C4DH73 117 aa2.55□□□□□ -2
LPP-221ENST00000618621 A0A1W2PRD5 423 aa2.55□□□□□ -2
LPP-221ENST00000618621 A0A1W2PRF3 423 aa2.55□□□□□ -2
LPP-221ENST00000618621 A0A1W2PRM7 423 aa2.55□□□□□ -2
LPP-221ENST00000618621 IGKV1D-12P01611 117 aa2.55□□□□□ -2
LPP-221ENST00000618621 RNASE4P34096 147 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 C2orf82Q6UX34 121 aa2.55□□□□□ -2
LPP-221ENST00000618621 FABP5P3A8MUU1 101 aa2.55□□□□□ -2
LPP-221ENST00000618621 UMODP07911 640 aa2.55□□□□□ -2
LPP-221ENST00000618621 GEMIN7Q9H840 131 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 LPAR2Q9HBW0 351 aa2.55□□□□□ -2
LPP-221ENST00000618621 NPIPB6E9PJ23 425 aa2.55□□□□□ -2
LPP-221ENST00000618621 RRHO14718 337 aa2.55□□□□□ -2
LPP-221ENST00000618621 EFNA2O43921 213 aa2.55□□□□□ -2
LPP-221ENST00000618621 PPBPP02775 128 aa2.55□□□□□ -2
LPP-221ENST00000618621 ZNF883P0CG24 379 aa2.55□□□□□ -2
LPP-221ENST00000618621 ORMDL3Q8N138 153 aa2.55□□□□□ -2
LPP-221ENST00000618621 SYS1-DBNDD2H3BUS1 97 aa2.55□□□□□ -2
LPP-221ENST00000618621 Q6P435 159 aa2.55□□□□□ -2
LPP-221ENST00000618621 TEN1Q86WV5 123 aa2.55□□□□□ -2
LPP-221ENST00000618621 FOXA2Q9Y261 457 aaPredicted RBP2.55□□□□□ -2
LPP-221ENST00000618621 WDR83OSQ9Y284 106 aa2.55□□□□□ -2
LPP-221ENST00000618621 C17orf98A8MV24 154 aa2.55□□□□□ -2
LPP-221ENST00000618621 CX3CL1P78423 397 aa2.55□□□□□ -2
LPP-221ENST00000618621 ACTL10Q5JWF8 245 aa2.55□□□□□ -2
LPP-221ENST00000618621 NEUROG1Q92886 237 aa2.55□□□□□ -2
LPP-221ENST00000618621 NXT2Q9NPJ8 142 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 F11RQ9Y624 299 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 TIAF1O95411 115 aa2.55□□□□□ -2
LPP-221ENST00000618621 KIF13BQ9NQT8 1826 aa2.55□□□□□ -2
LPP-221ENST00000618621 PRR19A6NJB7 356 aa2.55□□□□□ -2
LPP-221ENST00000618621 H3BRM9 83 aa2.55□□□□□ -2
LPP-221ENST00000618621 PAX4O43316 350 aa2.55□□□□□ -2
LPP-221ENST00000618621 MOSP00540 346 aa2.55□□□□□ -2
LPP-221ENST00000618621 CGAP01215 116 aa2.55□□□□□ -2
LPP-221ENST00000618621 TFF3Q07654 80 aa2.55□□□□□ -2
LPP-221ENST00000618621 MPV17L2Q567V2 206 aa2.55□□□□□ -2
LPP-221ENST00000618621 SLC25A48Q6ZT89 311 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 ATP5L2Q7Z4Y8 100 aa2.55□□□□□ -2
LPP-221ENST00000618621 ZIC4Q8N9L1 334 aa2.55□□□□□ -2
LPP-221ENST00000618621 LYPD6BQ8NI32 183 aa2.55□□□□□ -2
LPP-221ENST00000618621 IGKV3D-15A0A087WSY6 115 aa2.55□□□□□ -2
LPP-221ENST00000618621 LOXL3P58215 753 aa2.55□□□□□ -2
LPP-221ENST00000618621 C19orf54Q5BKX5 351 aa2.55□□□□□ -2
LPP-221ENST00000618621 PDCD11Q14690 1871 aaKnown RBP2.55□□□□□ -2
LPP-221ENST00000618621 IGKV1D-13A0A0B4J2D9 117 aa2.55□□□□□ -2
LPP-221ENST00000618621 A0A1B0GWB2 263 aa2.55□□□□□ -2
LPP-221ENST00000618621 TMEM238C9JI98 176 aa2.55□□□□□ -2
LPP-221ENST00000618621 F2Z2F3 143 aa2.55□□□□□ -2
LPP-221ENST00000618621 NDUFA3O95167 84 aa2.55□□□□□ -2
LPP-221ENST00000618621 IGKV1-13P0DP09 117 aa2.55□□□□□ -2
LPP-221ENST00000618621 DLX6P56179 175 aa2.55□□□□□ -2
LPP-221ENST00000618621 ZNF646O15015 1829 aaPredicted RBP2.55□□□□□ -2
LPP-221ENST00000618621 SERF1AO75920 110 aa2.55□□□□□ -2
LPP-221ENST00000618621 SAMD5Q5TGI4 173 aa2.55□□□□□ -2
LPP-221ENST00000618621 TMEM42Q69YG0 159 aa2.55□□□□□ -2
LPP-221ENST00000618621 ZNF562Q6V9R5 426 aa2.55□□□□□ -2
LPP-221ENST00000618621 H7C2G1 150 aa2.54□□□□□ -2
LPP-221ENST00000618621 HIST1H4AP62805 103 aaKnown RBP2.54□□□□□ -2
LPP-221ENST00000618621 NEU4Q8WWR8 484 aaPredicted RBP2.54□□□□□ -2
LPP-221ENST00000618621 ZNF837Q96EG3 531 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms