RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FNDC10F2Z333 226 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 VENTXO95231 258 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 TAS2R45P59539 299 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 TMEM249Q2WGJ8 235 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 PQLC2Q6ZP29 291 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 OR2T10Q8NGZ9 312 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 SGMS2Q8NHU3 365 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 RNASEH2CQ8TDP1 164 aaKnown RBP9.91□□□□□ -0.82
CIITA-212ENST00000618207 SFRP2Q96HF1 295 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 SNHG12Q9BXW3 62 aa9.91□□□□□ -0.82
CIITA-212ENST00000618207 AMMECR1Q9Y4X0 333 aaPredicted RBP9.91□□□□□ -0.82
CIITA-212ENST00000618207 TRBV24-1A0A075B6N3 115 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 TCRBV4S1A1TA0A5B7 111 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 NCBP2LA6PVI3 153 aaKnown RBP9.9□□□□□ -0.82
CIITA-212ENST00000618207 K7EN84 100 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 SPINK4O60575 86 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 TPTE2P1Q5T6R2 138 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 LINC00305Q7Z4B0 112 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 NEU4Q8WWR8 484 aaPredicted RBP9.9□□□□□ -0.82
CIITA-212ENST00000618207 ANAPC16Q96DE5 110 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 SLC25A2Q9BXI2 301 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 ZNF320A2RRD8 509 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 VMO1Q7Z5L0 202 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 KIR3DL3Q8N743 410 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 OR10D4PQ8NGN7 298 aa9.9□□□□□ -0.82
CIITA-212ENST00000618207 POLQO75417 2590 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 HELTA6NFD8 242 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 M0R143 59 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 RBP4P02753 201 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 CRYGBP07316 175 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
CIITA-212ENST00000618207 LY6G5BQ8NDX9 201 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 TMEM167BQ9NRX6 74 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 CSPG4Q6UVK1 2322 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 CSMD2Q7Z408 3487 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 TRAV34A0A0B4J273 112 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 GOSR1O95249 250 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 ATP5IP56385 69 aaPredicted RBP9.89□□□□□ -0.83
CIITA-212ENST00000618207 RANP62826 216 aaKnown RBP9.89□□□□□ -0.83
CIITA-212ENST00000618207 FXYD3Q14802 87 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 C8orf46Q8TAG6 207 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 FAM167A-AS1Q96KT0 104 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 WNT10AQ9GZT5 417 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 CELSR2Q9HCU4 2923 aa9.89□□□□□ -0.83
CIITA-212ENST00000618207 LY6LH3BQJ8 138 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 TOX4O94842 621 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 ERVFC1-1P60608 527 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 SLC35B1P78383 322 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 OR5R1Q8NH85 324 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 PAXXQ9BUH6 204 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 BPESC1Q9GZL8 116 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 RNASE7Q9H1E1 156 aaKnown RBP9.88□□□□□ -0.83
CIITA-212ENST00000618207 PSMB11A5LHX3 300 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 PPP1R2P9O14990 202 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 GNG4P50150 75 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 TEX38Q6PEX7 206 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 OR10G8Q8NGN5 311 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 FABP4P15090 132 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 LYZP61626 148 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 GNG5P63218 68 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 KCNIP4Q6PIL6 250 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 DTX2Q86UW9 622 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 EAF1Q96JC9 268 aaPredicted RBP9.88□□□□□ -0.83
CIITA-212ENST00000618207 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
CIITA-212ENST00000618207 INS-IGF2F8WCM5 200 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 TCF21O43680 179 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 TXNDC17Q9BRA2 123 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 F11RQ9Y624 299 aaKnown RBP9.87□□□□□ -0.83
CIITA-212ENST00000618207 NBR2O15453 112 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
CIITA-212ENST00000618207 PRTN3P24158 256 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 TCL1AP56279 114 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 SERTAD4Q9NUC0 356 aa9.87□□□□□ -0.83
CIITA-212ENST00000618207 IGHV3OR16-10A0A075B7F0 116 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 IGHV3-23P01764 117 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 CEACAM3P40198 252 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 MRPL41Q8IXM3 137 aaKnown RBP9.86□□□□□ -0.83
CIITA-212ENST00000618207 OR1L4Q8NGR5 311 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 USP9YO00507 2555 aaPredicted RBP9.86□□□□□ -0.83
CIITA-212ENST00000618207 LRRK2Q5S007 2527 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 TIGITQ495A1 244 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 PRR27Q6MZM9 219 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 OR11H6Q8NGC7 330 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 CFHR4Q92496 578 aa9.86□□□□□ -0.83
CIITA-212ENST00000618207 ABCA2Q9BZC7 2435 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 A0A1B0GUS0 222 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 CA1P00915 261 aaPredicted RBP9.85□□□□□ -0.83
CIITA-212ENST00000618207 PSG1P11464 419 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 THAP8Q8NA92 274 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 WFDC12Q8WWY7 111 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 IMMP2LQ96T52 175 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 C19orf24Q9BVV8 132 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 SELENOTP62341 195 aa9.85□□□□□ -0.83
CIITA-212ENST00000618207 NUDT11Q96G61 164 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms