RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 MTORP42345 2549 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 TCRBV4S1A1TA0A5B7 111 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 B4DSR2 109 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 K7EIM0 57 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 ATP6V0E1O15342 81 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 NDUFB4O95168 129 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 GCHFRP30047 84 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 BRS3P32247 399 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 TAGLN2P37802 199 aaKnown RBP6.14□□□□□ -1.43
NEK3-207ENST00000617054 ZNF343Q6P1L6 599 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 RBM14Q96PK6 669 aaKnown RBP6.14□□□□□ -1.43
NEK3-207ENST00000617054 NIPSNAP3BQ9BS92 247 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 DNAJC4Q9NNZ3 241 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
NEK3-207ENST00000617054 SCO2A0A1W2PP80 73 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 H3BUX3 64 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 COX7A2P2O60397 106 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 CXorf1O96002 111 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 PSG1P11464 419 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 EBI3Q14213 229 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 Q5PR19 223 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 LINC00305Q7Z4B0 112 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 SMIM7Q9BQ49 75 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 PARLQ9H300 379 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 A0A096LNT2 108 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 PSMB11A5LHX3 300 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 NDUFB8O95169 186 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 IFNA1P01562 189 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 CRYGCP07315 174 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 LYZP61626 148 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 CIARTQ8N365 385 aaPredicted RBP6.13□□□□□ -1.43
NEK3-207ENST00000617054 FAM24BQ8N5W8 94 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 OR5AU1Q8NGC0 362 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 Q96MF0 132 aa6.13□□□□□ -1.43
NEK3-207ENST00000617054 OR2T8A6NH00 312 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 J3QKU1 62 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 GOSR1O95249 250 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 AMY1AP04745 511 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ATP5IP56385 69 aaPredicted RBP6.12□□□□□ -1.43
NEK3-207ENST00000617054 BLCAPP62952 87 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ADIRFQ15847 76 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 DEFB113Q30KQ7 82 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 UNQ5815/PRO19632Q6UWF5 114 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ZNF114Q8NC26 417 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 TMEM116Q8NCL8 245 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 NOL4LQ96MY1 436 aaPredicted RBP6.12□□□□□ -1.43
NEK3-207ENST00000617054 SLC25A2Q9BXI2 301 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 CR1P17927 2039 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 OOSP1A8MZH6 123 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 FNDC10F2Z333 226 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 IGLC1P0CG04 106 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 SGK494Q96LW2 274 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 IGKV1-17P01599 117 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ETFRF1Q6IPR1 90 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 LCNL1Q6ZST4 164 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 ZFP82Q8N141 532 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 THAP8Q8NA92 274 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 NECAP1Q8NC96 275 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 TVP23CQ96ET8 276 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 FAM167A-AS1Q96KT0 104 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 LINC00479Q96M42 142 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 DUX5Q96PT3 197 aa6.12□□□□□ -1.43
NEK3-207ENST00000617054 PVRIGQ6DKI7 326 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 SHISA2Q6UWI4 295 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 IL17RELQ6ZVW7 336 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 C5orf56Q8N8D9 126 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 WFDC11Q8NEX6 87 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 SMDT1Q9H4I9 107 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 MANBALQ9NQG1 85 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 C8orf88P0DMB2 117 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 Q56UQ5 140 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 LINC01356Q8N9X3 169 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 SDF2L1Q9HCN8 221 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 KCNIP2Q9NS61 270 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 TECRQ9NZ01 308 aaKnown RBP6.11□□□□□ -1.43
NEK3-207ENST00000617054 C1RLQ9NZP8 487 aa6.11□□□□□ -1.43
NEK3-207ENST00000617054 TRBV20OR9-2A0A075B6H5 130 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 IGLV11-55A0A075B6I3 123 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 COLCA2A8K830 154 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 RD3LP0DJH9 198 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 CRYBB3P26998 211 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 RANP62826 216 aaKnown RBP6.1□□□□□ -1.43
NEK3-207ENST00000617054 PSMG3-AS1Q96PY0 264 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 GGTLC3B5MD39 225 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 F8W735 103 aaPredicted RBP6.1□□□□□ -1.43
NEK3-207ENST00000617054 GNG7O60262 68 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 OR2C1O95371 312 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 IGHV4-59P01825 116 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 SLC25A16P16260 332 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 EDN2P20800 178 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 UBE2L3P68036 154 aaKnown RBP6.1□□□□□ -1.43
NEK3-207ENST00000617054 DEFB112Q30KQ8 113 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 TTC9CQ8N5M4 171 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 C2CD4CQ8TF44 421 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 CHRDL1Q9BU40 450 aa6.1□□□□□ -1.43
NEK3-207ENST00000617054 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms