RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 A0A0U1RQK1 487 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 GP9P14770 177 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 TMEM11P17152 192 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 RPL15P61313 204 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 HIST3H2BBQ8N257 126 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 TTC9CQ8N5M4 171 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 AJUBAQ96IF1 538 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 ZNF48Q96MX3 618 aaPredicted RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 V9GYV3 84 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 PEX7O00628 323 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 ISLRO14498 428 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 IGKV1-17P01599 117 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 CNN1P51911 297 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 ERVFC1-1P60608 527 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 COA6Q5JTJ3 125 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 ASPHD1Q5U4P2 390 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 GAR1Q9NY12 217 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 MRPL27Q9P0M9 148 aaKnown RBP12.43□□□□□ -0.42
NR1H3-235ENST00000616973 TMEM14CQ9P0S9 112 aa12.43□□□□□ -0.42
NR1H3-235ENST00000616973 NBEAP1P0C6P0 100 aa12.42□□□□□ -0.42
NR1H3-235ENST00000616973 FAM106CPP0CH98 169 aa12.42□□□□□ -0.42
NR1H3-235ENST00000616973 OR5I1Q13606 314 aa12.42□□□□□ -0.42
NR1H3-235ENST00000616973 RBM14Q96PK6 669 aaKnown RBP12.42□□□□□ -0.42
NR1H3-235ENST00000616973 C1RLQ9NZP8 487 aa12.42□□□□□ -0.42
NR1H3-235ENST00000616973 PKD1L2Q7Z442 2459 aa12.42□□□□□ -0.42
NR1H3-235ENST00000616973 ACACBO00763 2458 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 TRAV30A0A087WSZ9 112 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 NCBP2LA6PVI3 153 aaKnown RBP12.41□□□□□ -0.42
NR1H3-235ENST00000616973 RPEL1Q2QD12 228 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 SLC17A3O00476 420 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 TOMM40O96008 361 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 S100A2P29034 98 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 BRS3P32247 399 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 YPEL3P61236 119 aaPredicted RBP12.41□□□□□ -0.42
NR1H3-235ENST00000616973 LYZP61626 148 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 TMEM183AQ8IXX5 376 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 TMEM190Q8WZ59 177 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 FANCD2OSQ96PS1 177 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 SLC25A39Q9BZJ4 359 aaPredicted RBP12.41□□□□□ -0.42
NR1H3-235ENST00000616973 EPDR1Q9UM22 224 aa12.41□□□□□ -0.42
NR1H3-235ENST00000616973 RANP62826 216 aaKnown RBP12.4□□□□□ -0.42
NR1H3-235ENST00000616973 NDPQ00604 133 aa12.4□□□□□ -0.42
NR1H3-235ENST00000616973 TMEM183BQ1AE95 376 aa12.4□□□□□ -0.42
NR1H3-235ENST00000616973 Q8N9W7 124 aa12.4□□□□□ -0.42
NR1H3-235ENST00000616973 KLF12Q9Y4X4 402 aa12.4□□□□□ -0.42
NR1H3-235ENST00000616973 WNK2Q9Y3S1 2297 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 SAA4P35542 130 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 MFAP4P55083 255 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 GFI1BQ5VTD9 330 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 LINC00469Q8N7U9 141 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 GPR61Q9BZJ8 451 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 TRAPPC1Q9Y5R8 145 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 PGPA6NDG6 321 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 NDUFS8O00217 210 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 ZNF600Q6ZNG1 722 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 FAM231DQ6ZW35 169 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 C5orf17Q8NAS9 161 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 BLNKQ8WV28 456 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 PIMREGQ9BSJ6 248 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 THYN1Q9P016 225 aa12.39□□□□□ -0.43
NR1H3-235ENST00000616973 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 WI2-2373I1.2A0A1W2PRP0 233 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 NPFFO15130 113 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 SLC25A5P05141 298 aaKnown RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 HIST1H1EP10412 219 aaKnown RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 PAX8Q06710 450 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 KLF17Q5JT82 389 aaPredicted RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 IBA57Q5T440 356 aaKnown RBP12.38□□□□□ -0.43
NR1H3-235ENST00000616973 ZNF491Q8N8L2 437 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 TMEM68Q96MH6 324 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 CCL19Q99731 98 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 RNF24Q9Y225 148 aa12.38□□□□□ -0.43
NR1H3-235ENST00000616973 XKRY2A2RUG3 117 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 H3BRN7 92 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 KLK9Q2XQG4 91 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 FAM120AOSQ5T036 256 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 BAGE2Q86Y30 109 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 FAM168AQ92567 244 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 ATG101Q9BSB4 218 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 RNASE7Q9H1E1 156 aaKnown RBP12.37□□□□□ -0.43
NR1H3-235ENST00000616973 KLK9Q9UKQ9 250 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 VWC2LB2RUY7 222 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 GNG7O60262 68 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 MGST1P10620 155 aaKnown RBP12.37□□□□□ -0.43
NR1H3-235ENST00000616973 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
NR1H3-235ENST00000616973 LEMD1Q68G75 181 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 S100A7AQ86SG5 101 aa12.37□□□□□ -0.43
NR1H3-235ENST00000616973 C10orf105Q8TEF2 133 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 321.5 ms