RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 WDR90Q96KV7 1748 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 NUP210LQ5VU65 1888 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 GAB4Q2WGN9 574 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 FER1L6-AS2Q96M78 137 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 ONECUT1Q9UBC0 465 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 NUP210Q8TEM1 1887 aaPredicted RBP11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 EVI2AP22794 236 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 VKORC1Q9BQB6 163 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 PRDM6Q9NQX0 595 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.62
PPP4R3B-205ENST00000616288 DPM2O94777 84 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 CLPSP04118 112 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 CRYGSP22914 178 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 FXYD2P54710 66 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 LOXL3P58215 753 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 CIARTQ8N365 385 aaPredicted RBP11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 OR1L8Q8NGR8 309 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 PRDM14Q9GZV8 571 aa11.15□□□□□ -0.63
PPP4R3B-205ENST00000616288 PLXNA2O75051 1894 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 CCL5P13501 91 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 HERVK_113P61574 105 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 NRN1LQ496H8 165 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 NABP1Q96AH0 204 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 LIFP15018 202 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 DLX1P56177 255 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 MLANAQ16655 118 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGHV3OR15-7A0A075B7D8 119 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 LINC00473A8K010 186 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 DLL1O00548 723 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 SLC22A18ASQ8N1D0 253 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 ASCL2Q99929 193 aa11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
PPP4R3B-205ENST00000616288 A0A1W2PQF6 199 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 MYOD1P15172 320 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 MRPS21P82921 87 aaKnown RBP11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 PEAR1Q5VY43 1037 aaPredicted RBP11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 OR13A1Q8NGR1 328 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 C11orf52Q96A22 123 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGHV1OR21-1A0A087WYE8 117 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 IFI27L2Q9H2X8 130 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 A0A1W2PPC4 97 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 NPIPB5A8MRT5 1133 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 SMKR1H3BMG3 65 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLK10O43240 276 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 GFRA3O60609 400 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 MEIG1Q5JSS6 88 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLF17Q5JT82 389 aaPredicted RBP11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 LHX8Q68G74 356 aa11.13□□□□□ -0.63
PPP4R3B-205ENST00000616288 DOPEY2Q9Y3R5 2298 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGKV3D-11A0A0A0MRZ8 115 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 MT-ATP8P03928 68 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF747Q9BV97 191 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 RAXQ9Y2V3 346 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 FAM90A27PA6NNH2 459 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 HIGD1AQ9Y241 93 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 NPIPB6E9PJ23 425 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 RNPS1Q15287 305 aaKnown RBP11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 TMEM95Q3KNT9 176 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF295-AS1Q8N0V1 137 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 Q9H3A6 140 aa11.12□□□□□ -0.63
PPP4R3B-205ENST00000616288 PRR33A8MZF0 331 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLRC4-KLRK1H3BQV0 150 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 PRSS2P07478 247 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 ARMS2P0C7Q2 107 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLF5Q13887 457 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF146Q15072 292 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 Q6ZS49 121 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 KLF12Q9Y4X4 402 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 PLXNB1O43157 2135 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 FOXF2Q12947 444 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 IFITM1P13164 125 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 CFHR2P36980 270 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 ZNF441Q8N8Z8 693 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 SPTBN1Q01082 2364 aaKnown RBP11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 LYZL6O75951 148 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 IGHV4-39P01824 125 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 LINC00271P0C7V0 271 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 TMEM42Q69YG0 159 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 FOXI2Q6ZQN5 318 aa11.11□□□□□ -0.63
PPP4R3B-205ENST00000616288 ANAPC1Q9H1A4 1944 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 TRAV8-4A0A0B4J246 113 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 VMA21Q3ZAQ7 101 aa11.1□□□□□ -0.63
PPP4R3B-205ENST00000616288 SHISA2Q6UWI4 295 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms