RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 COX8AP10176 69 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 TMEM164Q5U3C3 297 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 Q6ZR03 302 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 MGST3O14880 152 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 MZT1Q08AG7 82 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 FAM214BQ7L5A3 538 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 ZGRF1Q86YA3 2104 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 TTTY12Q9BZ98 90 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 JPT1Q9UK76 154 aa12.78□□□□□ -0.36
SYNRG-223ENST00000616179 CHTOPQ9Y3Y2 248 aaKnown RBP12.78□□□□□ -0.36
SYNRG-223ENST00000616179 MED13LQ71F56 2210 aa12.77□□□□□ -0.36
SYNRG-223ENST00000616179 HIST1H4GQ99525 98 aa12.77□□□□□ -0.36
SYNRG-223ENST00000616179 MRPL32Q9BYC8 188 aaKnown RBP12.77□□□□□ -0.36
SYNRG-223ENST00000616179 TMEM160Q9NX00 188 aa12.77□□□□□ -0.36
SYNRG-223ENST00000616179 G3V4G9 280 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 DLL1O00548 723 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 IFI27P40305 119 aaPredicted RBP12.77□□□□□ -0.37
SYNRG-223ENST00000616179 MEOX1P50221 254 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF766Q5HY98 468 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 KLRC4-KLRK1H3BQV0 150 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 H3BRM9 83 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 TGFAP01135 160 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 KMT2EQ8IZD2 1858 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 PRELID3AQ96N28 172 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 SCRT2Q9NQ03 307 aa12.77□□□□□ -0.37
SYNRG-223ENST00000616179 TWIST1Q15672 202 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 CCL13Q99616 98 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 C19orf24Q9BVV8 132 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
SYNRG-223ENST00000616179 M0R1B8 84 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 RASL11AQ6T310 242 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 AMTNQ6UX39 209 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 C6orf15Q6UXA7 325 aaPredicted RBP12.76□□□□□ -0.37
SYNRG-223ENST00000616179 WDR82Q6UXN9 313 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 VPS13AQ96RL7 3174 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 TMEM249Q2WGJ8 235 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
SYNRG-223ENST00000616179 PCNX1Q96RV3 2341 aa12.76□□□□□ -0.37
SYNRG-223ENST00000616179 ATP5L2Q7Z4Y8 100 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 PCP2Q8IVA1 136 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 LINC00470Q9BZP3 86 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 SPTBN2O15020 2390 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 J3QW42 95 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 CNIH1O95406 144 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 CD69Q07108 199 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 STXBP6Q8NFX7 210 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 Q9H3A6 140 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 HIF1ANQ9NWT6 349 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 TRGV5A0A0B4J1U4 118 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 KBTBD11-OT1A0A1B0GTJ5 212 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 A0A1W2PPM0 123 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 SCGB1C2P0DMR2 95 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 TTTY13Q9BZ97 58 aa12.75□□□□□ -0.37
SYNRG-223ENST00000616179 IGKV1-16P04430 117 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 PRR20EP86478 221 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 PRR20CP86479 221 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 PRR20DP86480 221 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 PRR20BP86481 221 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 PRR20AP86496 221 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 MBNL2Q5VZF2 373 aaKnown RBP12.74□□□□□ -0.37
SYNRG-223ENST00000616179 EXOC3-AS1Q8N2X6 119 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 SPTA1P02549 2419 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 TNRC6AQ8NDV7 1962 aaKnown RBP12.74□□□□□ -0.37
SYNRG-223ENST00000616179 GAGE12HA6NDE8 117 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 NCR2O95944 276 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 ARMS2P0C7Q2 107 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF134P52741 427 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 TRIOO75962 3097 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 CPAMD8Q8IZJ3 1885 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 SAA1P0DJI8 122 aaPredicted RBP12.74□□□□□ -0.37
SYNRG-223ENST00000616179 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 ATP6V0BQ99437 205 aa12.74□□□□□ -0.37
SYNRG-223ENST00000616179 D6R8Y8 96 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 SMKR1H3BMG3 65 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 TNFSF15O95150 251 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 PPIFP30405 207 aaKnown RBP12.73□□□□□ -0.37
SYNRG-223ENST00000616179 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 SMAD7O15105 426 aaKnown RBP12.73□□□□□ -0.37
SYNRG-223ENST00000616179 ORM1P02763 201 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 CFHR2P36980 270 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 CEACAM3P40198 252 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 RPS20P60866 119 aaKnown RBP12.73□□□□□ -0.37
SYNRG-223ENST00000616179 GTSCR1Q86UQ5 136 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 Q8N7P7 452 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 NPFFR1Q9GZQ6 430 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 MYO15AQ9UKN7 3530 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 LAMA1P25391 3075 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 IGLV2-8P01709 118 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 SSBP2P81877 361 aaPredicted RBP12.73□□□□□ -0.37
SYNRG-223ENST00000616179 Q8TCH9 128 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 IFI27L1Q96BM0 104 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 ZNF479Q96JC4 524 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 KLK15Q9H2R5 256 aa12.73□□□□□ -0.37
SYNRG-223ENST00000616179 PATE3B3GLJ2 98 aa12.72□□□□□ -0.37
SYNRG-223ENST00000616179 KLF5Q13887 457 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms