RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 ACOT7LQ6ZUV0 252 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 SMIM8Q96KF7 97 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
CBWD3-211ENST00000615061 C7orf66A4D0T2 115 aa12.44□□□□□ -0.42
CBWD3-211ENST00000615061 P2RY1P47900 373 aa12.44□□□□□ -0.42
CBWD3-211ENST00000615061 RPL11P62913 178 aaKnown RBP12.44□□□□□ -0.42
CBWD3-211ENST00000615061 WFDC3Q8IUB2 231 aa12.44□□□□□ -0.42
CBWD3-211ENST00000615061 OR51G1Q8NGK1 321 aa12.44□□□□□ -0.42
CBWD3-211ENST00000615061 U3KQE9 123 aa12.44□□□□□ -0.42
CBWD3-211ENST00000615061 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 BMI1P35226 326 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 OR2F1Q13607 317 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 ZNF124Q15973 351 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 RNF125Q96EQ8 232 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 PBDC1Q9BVG4 233 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 MS4A6AQ9H2W1 248 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 RETNQ9HD89 108 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 LSM5Q9Y4Y9 91 aaKnown RBP12.43□□□□□ -0.42
CBWD3-211ENST00000615061 A0A1W2PS18 150 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 INMT-MINDY4F8WBC2 141 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 HNRNPCP07910 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
CBWD3-211ENST00000615061 DEFA1P59665 94 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 DEFA3P59666 94 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 TMEM14EPQ6UXP3 125 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 APRG1Q8IVJ8 170 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 RAB40CQ96S21 281 aa12.43□□□□□ -0.42
CBWD3-211ENST00000615061 K7EPK0 472 aa12.42□□□□□ -0.42
CBWD3-211ENST00000615061 GATA2P23769 480 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-211ENST00000615061 RRAS2P62070 204 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-211ENST00000615061 TMEM182Q6ZP80 229 aaPredicted RBP12.42□□□□□ -0.42
CBWD3-211ENST00000615061 FAM24BQ8N5W8 94 aa12.42□□□□□ -0.42
CBWD3-211ENST00000615061 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
CBWD3-211ENST00000615061 TRGV9Q99603 122 aa12.42□□□□□ -0.42
CBWD3-211ENST00000615061 TMEM231Q9H6L2 316 aa12.42□□□□□ -0.42
CBWD3-211ENST00000615061 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 AKR1C1Q04828 323 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 ARL16Q0P5N6 197 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 IL15RAQ13261 267 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 GSG1LQ6UXU4 331 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 NARS2Q96I59 477 aaKnown RBP12.41□□□□□ -0.42
CBWD3-211ENST00000615061 MARVELD1Q9BSK0 173 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 RABAC1Q9UI14 185 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 DNASE2O00115 360 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-211ENST00000615061 TSC22D2O75157 780 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 SIX6O95475 246 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 LYZP61626 148 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 C16orf54Q6UWD8 224 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 STPG3Q8N7X2 389 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 STXBP6Q8NFX7 210 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 GLMPQ8WWB7 406 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
CBWD3-211ENST00000615061 GPN1Q9HCN4 374 aaPredicted RBP12.41□□□□□ -0.42
CBWD3-211ENST00000615061 BUB3O43684 328 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 CD5P06127 495 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 TAS2R30P59541 319 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 PAFAH1B2P68402 229 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 WWC2-AS2Q96NR7 200 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 FAM110AQ9BQ89 295 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 C11orf1Q9H5F2 150 aa12.4□□□□□ -0.42
CBWD3-211ENST00000615061 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
CBWD3-211ENST00000615061 CSMD3Q7Z407 3707 aa12.39□□□□□ -0.43
CBWD3-211ENST00000615061 SNRPGP15A8MWD9 76 aa12.39□□□□□ -0.43
CBWD3-211ENST00000615061 GOSR2O14653 212 aa12.39□□□□□ -0.43
CBWD3-211ENST00000615061 S100A10P60903 97 aa12.39□□□□□ -0.43
CBWD3-211ENST00000615061 RAB32Q13637 225 aa12.39□□□□□ -0.43
CBWD3-211ENST00000615061 LOC102724200A0A096LPH7 203 aaPredicted RBP12.38□□□□□ -0.43
CBWD3-211ENST00000615061 L7N2F9 121 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 PRAF2O60831 178 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 EIF2B2P49770 351 aaKnown RBP12.38□□□□□ -0.43
CBWD3-211ENST00000615061 VAMP2P63027 116 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 TMEM144Q7Z5S9 345 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 DCANP1Q8TF63 244 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 GRAMD2BQ96HH9 432 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 GGTLC1Q9BX51 225 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 FAM24AA6NFZ4 105 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 FABP1P07148 127 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 RPL35AP18077 110 aaKnown RBP12.38□□□□□ -0.43
CBWD3-211ENST00000615061 CAV2P51636 162 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 DLK1P80370 383 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
CBWD3-211ENST00000615061 K7EQG2 157 aa12.37□□□□□ -0.43
CBWD3-211ENST00000615061 BCAP31P51572 246 aa12.37□□□□□ -0.43
CBWD3-211ENST00000615061 DEFB131AP59861 70 aa12.37□□□□□ -0.43
CBWD3-211ENST00000615061 HELTA6NFD8 242 aa12.36□□□□□ -0.43
CBWD3-211ENST00000615061 CST7O76096 145 aa12.36□□□□□ -0.43
CBWD3-211ENST00000615061 SIGLEC15Q6ZMC9 328 aa12.36□□□□□ -0.43
CBWD3-211ENST00000615061 STARD9Q9P2P6 4700 aa12.36□□□□□ -0.43
CBWD3-211ENST00000615061 TRAV2A0A0B4J234 112 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 ZNF688P0C7X2 276 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 ORM2P19652 201 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 H2BFSP57053 126 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 SLC38A11Q08AI6 406 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 CYP2G1PQ6ZSU1 146 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 TMEM217Q8N7C4 229 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 BPIFCQ8NFQ6 507 aa12.35□□□□□ -0.43
CBWD3-211ENST00000615061 NPVFQ9HCQ7 196 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms