RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 USF1P22415 310 aaPredicted RBP13.34□□□□□ -0.27
CNOT3-208ENST00000613073 LRRC10Q5BKY1 277 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 TCF19Q9Y242 345 aa13.34□□□□□ -0.27
CNOT3-208ENST00000613073 hDV102S1A0JD36 115 aa13.33□□□□□ -0.27
CNOT3-208ENST00000613073 MT-ND6P03923 174 aa13.33□□□□□ -0.27
CNOT3-208ENST00000613073 GATA2P23769 480 aaPredicted RBP13.33□□□□□ -0.27
CNOT3-208ENST00000613073 ZNF841Q6ZN19 808 aa13.33□□□□□ -0.27
CNOT3-208ENST00000613073 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.27
CNOT3-208ENST00000613073 FAM90A9PA6NNJ1 464 aa13.33□□□□□ -0.28
CNOT3-208ENST00000613073 AMY1AP04745 511 aa13.33□□□□□ -0.28
CNOT3-208ENST00000613073 VDAC2P45880 294 aaPredicted RBP13.33□□□□□ -0.28
CNOT3-208ENST00000613073 PNKDQ8N490 385 aa13.33□□□□□ -0.28
CNOT3-208ENST00000613073 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
CNOT3-208ENST00000613073 GGTLC1Q9BX51 225 aa13.33□□□□□ -0.28
CNOT3-208ENST00000613073 ASH1LQ9NR48 2969 aaKnown RBP13.33□□□□□ -0.28
CNOT3-208ENST00000613073 GAGE12BA1L429 117 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 HELTA6NFD8 242 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 SRRM4A7MD48 611 aaKnown RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 B9A039 149 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 UBE2G1P62253 170 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 RPL8P62917 257 aaKnown RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 RHOGP84095 191 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 ADORA2A-AS1P86434 159 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 MEF2CQ06413 473 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 TNFRSF13BO14836 293 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 LY6DQ14210 128 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 DIAPH2-AS1Q14236 149 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 ADTRPQ96IZ2 230 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 OR8B2Q96RD0 313 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 H0Y8G0 127 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 DLX1P56177 255 aa13.32□□□□□ -0.28
CNOT3-208ENST00000613073 PRB3Q04118 309 aaPredicted RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 MRPL20Q9BYC9 149 aaKnown RBP13.32□□□□□ -0.28
CNOT3-208ENST00000613073 MALRD1Q5VYJ5 2156 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 H0YJW9 148 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 CIDEAO60543 219 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 NPY1RP25929 384 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 PSG9Q00887 426 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 FAM168AQ92567 244 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 HLA-DQA1P01909 254 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 LOXP28300 417 aaPredicted RBP13.31□□□□□ -0.28
CNOT3-208ENST00000613073 RTL8BQ17RB0 113 aa13.31□□□□□ -0.28
CNOT3-208ENST00000613073 ZNF331Q9NQX6 463 aaPredicted RBP13.31□□□□□ -0.28
CNOT3-208ENST00000613073 RHOBP62745 196 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 EFNB3Q15768 340 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 BVES-AS1Q5T3Y7 98 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 OR10X1Q8NGY0 326 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 CHODLQ9H9P2 273 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 TMEM14BQ9NUH8 114 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 TIMM8BQ9Y5J9 83 aaPredicted RBP13.3□□□□□ -0.28
CNOT3-208ENST00000613073 PIEZO1Q92508 2521 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 TRAV8-6A0A0B4J262 113 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 OR4C46A6NHA9 309 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 C9JCJ5 164 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 K7ERU9 68 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 LY6HO94772 140 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 GOSR1O95249 250 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 OPRK1P41145 380 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 CAMPP49913 170 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 PSG5Q15238 335 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 IBA57Q5T440 356 aaKnown RBP13.3□□□□□ -0.28
CNOT3-208ENST00000613073 OR2T6Q8NHC8 308 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 TXNDC17Q9BRA2 123 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 OR51B2Q9Y5P1 312 aa13.3□□□□□ -0.28
CNOT3-208ENST00000613073 HSPE1P61604 102 aaKnown RBP13.29□□□□□ -0.28
CNOT3-208ENST00000613073 TIGITQ495A1 244 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 MIR17HGQ75NE6 70 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 HIVEP3Q5T1R4 2406 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 SNAI2O43623 268 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 TOX4O94842 621 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 CD24P25063 80 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 MFAP2P55001 183 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 TMEM30BQ3MIR4 351 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 ZNF833PQ6ZTB9 187 aa13.29□□□□□ -0.28
CNOT3-208ENST00000613073 FOXA2Q9Y261 457 aaPredicted RBP13.29□□□□□ -0.28
CNOT3-208ENST00000613073 A0A087X0K7 114 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 OR10J4P0C629 311 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 LINC00869P0C866 280 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 TMEM249Q2WGJ8 235 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 FBXL19-AS1Q494R0 122 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 STPG3Q8N7X2 389 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 OR8B3Q8NGG8 313 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 ENY2Q9NPA8 101 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 SVEP1Q4LDE5 3571 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 C2orf70A6NJV1 201 aa13.28□□□□□ -0.28
CNOT3-208ENST00000613073 SAA1P0DJI8 122 aaPredicted RBP13.28□□□□□ -0.28
CNOT3-208ENST00000613073 COL12A1Q99715 3063 aa13.27□□□□□ -0.28
CNOT3-208ENST00000613073 J3QR06 171 aa13.27□□□□□ -0.28
CNOT3-208ENST00000613073 REG1AP05451 166 aa13.27□□□□□ -0.28
CNOT3-208ENST00000613073 PMCHL2Q9BQD1 86 aa13.27□□□□□ -0.28
CNOT3-208ENST00000613073 TNFRSF19Q9NS68 423 aa13.27□□□□□ -0.28
CNOT3-208ENST00000613073 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.29
CNOT3-208ENST00000613073 GDF5OSQ5U4N7 250 aa13.27□□□□□ -0.29
CNOT3-208ENST00000613073 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
CNOT3-208ENST00000613073 HARBI1Q96MB7 349 aa13.27□□□□□ -0.29
CNOT3-208ENST00000613073 NAA38Q9BRA0 125 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms