RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RUSC1-AS1Q66K80 236 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 Q6ZRM9 215 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 MBD3L1Q8WWY6 194 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 SMIM12Q96EX1 92 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 ADTRPQ96IZ2 230 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
FAM3A-221ENST00000612856 PDE6DO43924 150 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 FOXA3P55318 350 aaPredicted RBP8.9□□□□□ -0.98
FAM3A-221ENST00000612856 UBE2G1P62253 170 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 PMCHL1Q16048 86 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 NRN1LQ496H8 165 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 SLC45A2Q9UMX9 530 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 KBTBD11-OT1A0A1B0GTJ5 212 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.98
FAM3A-221ENST00000612856 APCSP02743 223 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 ARL14EPLP0DKL9 152 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 PLP1P60201 277 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 ADORA2A-AS1P86434 159 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 OR4P4Q8NGL7 312 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 TP73-AS1Q9UF72 201 aa8.9□□□□□ -0.98
FAM3A-221ENST00000612856 SRRM5B3KS81 715 aa8.9□□□□□ -0.99
FAM3A-221ENST00000612856 TMEM178BH3BS89 294 aa8.9□□□□□ -0.99
FAM3A-221ENST00000612856 TIMM23O14925 209 aa8.9□□□□□ -0.99
FAM3A-221ENST00000612856 FRMD6-AS1P0C7T7 363 aa8.9□□□□□ -0.99
FAM3A-221ENST00000612856 ZFHX4Q86UP3 3567 aa8.9□□□□□ -0.99
FAM3A-221ENST00000612856 RAMP3O60896 148 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 MOSP00540 346 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 GATA2P23769 480 aaPredicted RBP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 PQLC2Q6ZP29 291 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 TM2D1Q9BX74 207 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 RNASE7Q9H1E1 156 aaKnown RBP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 TIMM9Q9Y5J7 89 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 GPX1P07203 203 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 MYOD1P15172 320 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 CCL1P22362 96 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 ZNF137PP52743 207 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 MIC13Q5XKP0 118 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 TRAV1-1A0A0B4J248 108 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 RBFOX2O43251 390 aaKnown RBP eCLIP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 SAP30O75446 220 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 UCP1P25874 307 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 TEX43Q6ZNM6 134 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 PSMG3Q9BT73 122 aaPredicted RBP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 GSX1Q9H4S2 264 aaPredicted RBP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 BEX4Q9NWD9 120 aaPredicted RBP8.89□□□□□ -0.99
FAM3A-221ENST00000612856 EXPH5Q8NEV8 1989 aa8.89□□□□□ -0.99
FAM3A-221ENST00000612856 TMSB15BA0A087X1C1 80 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 MUC21A0A0G2JKD1 596 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 MUC21A0A140T8X8 626 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 NDUFB8O95169 186 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 VENTXO95231 258 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 PAX9P55771 341 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 C20orf204Q6ZNR8 217 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 IGKV1D-17A0A075B6S4 117 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 HELTA6NFD8 242 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 H0Y980 276 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 ZNF324BQ6AW86 544 aaPredicted RBP8.88□□□□□ -0.99
FAM3A-221ENST00000612856 LYPD6Q86Y78 171 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 GTSF1LQ9H1H1 148 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 PLSCR2Q9NRY7 297 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 TMEM56-RWDD3S4R434 201 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 SAA2-SAA4A0A096LPE2 208 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 H3BUX3 64 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 C19orf84I3L1E1 186 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 SAA2P0DJI9 122 aaPredicted RBP8.88□□□□□ -0.99
FAM3A-221ENST00000612856 CSN1S1P47710 185 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 PSG5Q15238 335 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 TM4SF20Q53R12 229 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 TMEM200BQ69YZ2 307 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 SLC25A34Q6PIV7 304 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 DYNLRB2Q8TF09 96 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 ZNF324O75467 553 aaPredicted RBP8.88□□□□□ -0.99
FAM3A-221ENST00000612856 CRYBB3P26998 211 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 SLC35E4Q6ICL7 350 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 ZNF645Q8N7E2 425 aa8.88□□□□□ -0.99
FAM3A-221ENST00000612856 SSBP4Q9BWG4 385 aaPredicted RBP8.88□□□□□ -0.99
FAM3A-221ENST00000612856 hDV102S1A0JD36 115 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 OR4C46A6NHA9 309 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 WNT2P09544 360 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 OR4C13Q8NGP0 309 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 ADAMTS20P59510 1910 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 A0A087X0K7 114 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 WDR73Q6P4I2 378 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 NPIPB3Q92617 1050 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 RCHY1Q96PM5 261 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 TRAV30A0A087WSZ9 112 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 J3QW42 95 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 HAPLN4Q86UW8 402 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 TCF19Q9Y242 345 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 ATMQ13315 3056 aa8.87□□□□□ -0.99
FAM3A-221ENST00000612856 CEACAM4O75871 244 aa8.86□□□□□ -0.99
FAM3A-221ENST00000612856 UBE2L3P68036 154 aaKnown RBP8.86□□□□□ -0.99
FAM3A-221ENST00000612856 COLCA1Q6ZS62 124 aa8.86□□□□□ -0.99
FAM3A-221ENST00000612856 NPCDR1Q9BY65 106 aa8.86□□□□□ -0.99
FAM3A-221ENST00000612856 CSTL1Q9H114 145 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms