RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	CIART	Q8N365	385 aa	Predicted RBP	11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	TEX45	Q8NA69	505 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571		A0A1W2PRE2	83 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	GPR183	P32249	361 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	ACTL10	Q5JWF8	245 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	NIT1	Q86X76	327 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	TMEM208	Q9BTX3	173 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	PSMB2	P49721	201 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	SRSF7	Q16629	238 aa	Known RBP eCLIP	11.37	□□□□□ -0.59
MUC1-223	ENST00000611571		Q6ZR03	302 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	PRELID3A	Q96N28	172 aa		11.37	□□□□□ -0.59
MUC1-223	ENST00000611571	TRBV20OR9-2	A0A075B6H5	130 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	CX3CL1	P78423	397 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	MBNL3	Q9NUK0	354 aa	Known RBP	11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	LINC00527	Q9UJ94	153 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571		M0R381	172 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	C3orf79	P0CE67	100 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	CCDC144NL	Q6NUI1	221 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	PPP1R27	Q86WC6	154 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	SH2D7	A6NKC9	451 aa	Predicted RBP	11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	PMS2P5	A8MQ11	134 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	ZNF883	P0CG24	379 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	PLP1	P60201	277 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	NUTF2	P61970	127 aa	Known RBP	11.36	□□□□□ -0.59
MUC1-223	ENST00000611571	C1orf194	Q5T5A4	169 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571		Q6ZS49	121 aa		11.36	□□□□□ -0.59
MUC1-223	ENST00000611571		A8MWP6	167 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	BMI1	P35226	326 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	IGFL4	Q6B9Z1	124 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	RBPMS2	Q6ZRY4	209 aa	Known RBP	11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	PIEZO1	Q92508	2521 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	LOC105371242	A0A075B767	164 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	NPIPB11	E5RHQ5	1161 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	IGLV3-1	P01715	115 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	MDS2	Q8NDY4	140 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	ZNF414	Q96IQ9	312 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	TECTA	O75443	2155 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	TRBV6-6	A0A0A6YYG2	114 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	TCRBV4S1A1T	A0A5B7	111 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	hDV102S1	A0JD36	115 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	TM4SF5	O14894	197 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	SCRT1	Q9BWW7	348 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	DPM3	Q9P2X0	92 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	TNFSF13	O75888	250 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	DNLZ	Q5SXM8	178 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	FAM74A4	Q5TZK3	123 aa		11.35	□□□□□ -0.59
MUC1-223	ENST00000611571	UNQ6494/PRO21346	Q6UXR6	183 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	SNHG12	Q9BXW3	62 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	GNB1L	Q9BYB4	327 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	MAP1LC3A	Q9H492	121 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	NPIPB5	A8MRT5	1133 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571		M0R3E3	92 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	AREG	P15514	252 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	USP9Y	O00507	2555 aa	Predicted RBP	11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	CHD7	Q9P2D1	2997 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	LINC00614	P0C842	121 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	ZNF134	P52741	427 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	TMEM200B	Q69YZ2	307 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	HIST1H4G	Q99525	98 aa		11.34	□□□□□ -0.59
MUC1-223	ENST00000611571	FAM106CP	P0CH98	169 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	PSG1	P11464	419 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	DGAT2L7P	Q6IED9	249 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	NEUROG1	Q92886	237 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	C21orf62	Q9NYP8	219 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	FBXL7	Q9UJT9	491 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	SLC25A15	Q9Y619	301 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	TIMM23	O14925	209 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	MMP23A	O75900	390 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	FABP2	P12104	132 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	APOBEC3A	P31941	199 aa	Predicted RBP	11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	ZNF474	Q6S9Z5	364 aa	Predicted RBP	11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	LYPD2	Q6UXB3	125 aa		11.33	□□□□□ -0.6
MUC1-223	ENST00000611571	HTT	P42858	3142 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	EML6	Q6ZMW3	1958 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	TRAV9-2	A0A087WT02	112 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	NUP35	Q8NFH5	326 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	PLSCR4	Q9NRQ2	329 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	PHLDA3	Q9Y5J5	127 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	NCR2	O95944	276 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	IGHV3-11	P01762	117 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	GPX1	P07203	203 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	GLMP	Q8WWB7	406 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571		A1L4Q6	167 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	EVI2A	P22794	236 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	ATP5I	P56385	69 aa	Predicted RBP	11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	SSC4D	Q8WTU2	575 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	METTL26	Q96S19	204 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571	TMEM133	Q9H2Q1	129 aa		11.32	□□□□□ -0.6
MUC1-223	ENST00000611571		F2Z2F3	143 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	CIDEA	O60543	219 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	PRSS2	P07478	247 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	OR1N2	Q8NGR9	330 aa		11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	RNASE6	Q93091	150 aa	Known RBP	11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.31	□□□□□ -0.6
MUC1-223	ENST00000611571	TANC2	Q9HCD6	1990 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms