RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 VMO1Q7Z5L0 202 aa9.47□□□□□ -0.89
SRRT-213ENST00000611405 ITLN2Q8WWU7 325 aaPredicted RBP9.47□□□□□ -0.89
SRRT-213ENST00000611405 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
SRRT-213ENST00000611405 UBTD1Q9HAC8 227 aa9.47□□□□□ -0.89
SRRT-213ENST00000611405 HIGD1AQ9Y241 93 aa9.47□□□□□ -0.89
SRRT-213ENST00000611405 MINOS1-NBL1R4GNA1 71 aa9.47□□□□□ -0.89
SRRT-213ENST00000611405 PLXNB1O43157 2135 aa9.47□□□□□ -0.89
SRRT-213ENST00000611405 ATRXP46100 2492 aa9.46□□□□□ -0.89
SRRT-213ENST00000611405 TRBV9A0A0B4J1U6 114 aa9.46□□□□□ -0.89
SRRT-213ENST00000611405 C5orf64Q2M2E5 130 aa9.46□□□□□ -0.89
SRRT-213ENST00000611405 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
SRRT-213ENST00000611405 HIST1H1BP16401 226 aaKnown RBP9.46□□□□□ -0.9
SRRT-213ENST00000611405 EFNA4P52798 201 aa9.46□□□□□ -0.9
SRRT-213ENST00000611405 HES1Q14469 280 aa9.46□□□□□ -0.9
SRRT-213ENST00000611405 IBA57Q5T440 356 aaKnown RBP9.46□□□□□ -0.9
SRRT-213ENST00000611405 RASL11BQ9BPW5 248 aa9.46□□□□□ -0.9
SRRT-213ENST00000611405 EPDR1Q9UM22 224 aa9.46□□□□□ -0.9
SRRT-213ENST00000611405 PSG1P11464 419 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 GP9P14770 177 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 ZFP36P26651 326 aaKnown RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 RANP62826 216 aaKnown RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 ZNF124Q15973 351 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 OR8I2Q8N0Y5 310 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 GSX1Q9H4S2 264 aaPredicted RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 A0A1W2PRD5 423 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 A0A1W2PRF3 423 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 A0A1W2PRM7 423 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 K7EIM0 57 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 ADMP35318 185 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 CX3CL1P78423 397 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 TMEM183BQ1AE95 376 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 COX19Q49B96 90 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 BLNKQ8WV28 456 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 TMEM18Q96B42 140 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 LINC00479Q96M42 142 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 PGPA6NDG6 321 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 SLC25A5P05141 298 aaKnown RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 HOXB4P17483 251 aaPredicted RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 CBLN1P23435 193 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 LYZP61626 148 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 FAM231DQ6ZW35 169 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 GNB1LQ9BYB4 327 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 MRPL18Q9H0U6 180 aaKnown RBP9.45□□□□□ -0.9
SRRT-213ENST00000611405 TMEM14CQ9P0S9 112 aa9.45□□□□□ -0.9
SRRT-213ENST00000611405 SMIM27A0A1W2PRY6 76 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 PF4V1P10720 104 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 CD24P25063 80 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 ZNF562Q6V9R5 426 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 NBASA2RRP1 2371 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 NDUFS7O75251 213 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 IGKV1-17P01599 117 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 EBI3Q14213 229 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 JOSD1Q15040 202 aaPredicted RBP9.44□□□□□ -0.9
SRRT-213ENST00000611405 Q8N6K4 173 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 TMEM190Q8WZ59 177 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 CHRDL1Q9BU40 450 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 SIRPDQ9H106 197 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 SERTAD4Q9NUC0 356 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 KLF12Q9Y4X4 402 aa9.44□□□□□ -0.9
SRRT-213ENST00000611405 TRAV34A0A0B4J273 112 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 NPIPB5A8MRT5 1133 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 ZNF705GA8MUZ8 300 aaPredicted RBP9.43□□□□□ -0.9
SRRT-213ENST00000611405 GNLYP22749 145 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 IER3P46695 156 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 UBE2G1P62253 170 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 GBGT1Q8N5D6 347 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 C5orf17Q8NAS9 161 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 OR5R1Q8NH85 324 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 SLC25A39Q9BZJ4 359 aaPredicted RBP9.43□□□□□ -0.9
SRRT-213ENST00000611405 MRPL27Q9P0M9 148 aaKnown RBP9.43□□□□□ -0.9
SRRT-213ENST00000611405 MT-ND6P03923 174 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 GNG5P63218 68 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 IGFBPL1Q8WX77 278 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 ARPC1AQ92747 370 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 ATG101Q9BSB4 218 aa9.43□□□□□ -0.9
SRRT-213ENST00000611405 TBL2Q9Y4P3 447 aaKnown RBP9.43□□□□□ -0.9
SRRT-213ENST00000611405 IGHV2-70DA0A0C4DH43 119 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 GATCO43716 136 aaKnown RBP9.42□□□□□ -0.9
SRRT-213ENST00000611405 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
SRRT-213ENST00000611405 HIST1H1EP10412 219 aaKnown RBP9.42□□□□□ -0.9
SRRT-213ENST00000611405 UQCRFS1P47985 274 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 DYNAPQ8N1N2 210 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 NHLRC2Q8NBF2 726 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 TMEM68Q96MH6 324 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 FAM103A1Q9BTL3 118 aaKnown RBP9.42□□□□□ -0.9
SRRT-213ENST00000611405 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 TRAV30A0A087WSZ9 112 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 SNURFLB1AK76 121 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 TOMM40O96008 361 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 FBLN7Q53RD9 439 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 LEMD1Q68G75 181 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 TTC9CQ8N5M4 171 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 GRAMD2BQ96HH9 432 aa9.42□□□□□ -0.9
SRRT-213ENST00000611405 Q9H3A6 140 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms