RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 SLC17A3O00476 420 aa22.2■■□□□ 1.14
CSPG5-205ENST00000610462 GCGP01275 180 aa22.2■■□□□ 1.14
CSPG5-205ENST00000610462 ZNF562Q6V9R5 426 aa22.2■■□□□ 1.14
CSPG5-205ENST00000610462 RASL11BQ9BPW5 248 aa22.2■■□□□ 1.14
CSPG5-205ENST00000610462 IGLV2-8P01709 118 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 MYCNOSP40205 109 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 RPL15P61313 204 aaKnown RBP22.19■■□□□ 1.14
CSPG5-205ENST00000610462 TBX15Q96SF7 602 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 CDC42EP3Q9UKI2 254 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 HIGD1AQ9Y241 93 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 V9GYV3 84 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 FABP4P15090 132 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 UBE2E1P51965 193 aa22.19■■□□□ 1.14
CSPG5-205ENST00000610462 NCBP2LA6PVI3 153 aaKnown RBP22.18■■□□□ 1.14
CSPG5-205ENST00000610462 CNN1P51911 297 aaKnown RBP22.18■■□□□ 1.14
CSPG5-205ENST00000610462 CX3CL1P78423 397 aa22.18■■□□□ 1.14
CSPG5-205ENST00000610462 OSTCQ9NRP0 149 aa22.18■■□□□ 1.14
CSPG5-205ENST00000610462 PEX7O00628 323 aa22.18■■□□□ 1.14
CSPG5-205ENST00000610462 ARPC1AQ92747 370 aa22.18■■□□□ 1.14
CSPG5-205ENST00000610462 NPIPB5A8MRT5 1133 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 IGKV1-17P01599 117 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 GP9P14770 177 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 TMEM11P17152 192 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 LYZP61626 148 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 CDPF1Q6NVV7 123 aa22.17■■□□□ 1.14
CSPG5-205ENST00000610462 RBM14Q96PK6 669 aaKnown RBP22.17■■□□□ 1.14
CSPG5-205ENST00000610462 NBEAP1P0C6P0 100 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 RPEL1Q2QD12 228 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 ASPHD1Q5U4P2 390 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 IGHV4-39P01824 125 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 RANP62826 216 aaKnown RBP22.16■■□□□ 1.14
CSPG5-205ENST00000610462 TMEM183AQ8IXX5 376 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 BLNKQ8WV28 456 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 TRAPPC1Q9Y5R8 145 aa22.16■■□□□ 1.14
CSPG5-205ENST00000610462 SNRPCP09234 159 aaKnown RBP22.15■■□□□ 1.14
CSPG5-205ENST00000610462 PDLIM4P50479 330 aa22.15■■□□□ 1.14
CSPG5-205ENST00000610462 LINC00479Q96M42 142 aa22.15■■□□□ 1.14
CSPG5-205ENST00000610462 ISLRO14498 428 aa22.15■■□□□ 1.14
CSPG5-205ENST00000610462 RD3LP0DJH9 198 aa22.15■■□□□ 1.14
CSPG5-205ENST00000610462 COA6Q5JTJ3 125 aaKnown RBP22.15■■□□□ 1.14
CSPG5-205ENST00000610462 HIST1H2BLQ99880 126 aa22.15■■□□□ 1.14
CSPG5-205ENST00000610462 WNK2Q9Y3S1 2297 aa22.14■■□□□ 1.13
CSPG5-205ENST00000610462 TRAV20A0A0B4J274 112 aa22.14■■□□□ 1.13
CSPG5-205ENST00000610462 NDPQ00604 133 aa22.14■■□□□ 1.13
CSPG5-205ENST00000610462 KLF17Q5JT82 389 aaPredicted RBP22.14■■□□□ 1.13
CSPG5-205ENST00000610462 TTC9CQ8N5M4 171 aa22.14■■□□□ 1.13
CSPG5-205ENST00000610462 AJUBAQ96IF1 538 aa22.14■■□□□ 1.13
CSPG5-205ENST00000610462 PACRGQ96M98 296 aaPredicted RBP22.14■■□□□ 1.13
CSPG5-205ENST00000610462 RNASE7Q9H1E1 156 aaKnown RBP22.14■■□□□ 1.13
CSPG5-205ENST00000610462 IGLV11-55A0A075B6I3 123 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 XKRY2A2RUG3 117 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 GOSR1O95249 250 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 MGST1P10620 155 aaKnown RBP22.13■■□□□ 1.13
CSPG5-205ENST00000610462 LEMD1Q68G75 181 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 SLC25A39Q9BZJ4 359 aaPredicted RBP22.13■■□□□ 1.13
CSPG5-205ENST00000610462 MRPL27Q9P0M9 148 aaKnown RBP22.13■■□□□ 1.13
CSPG5-205ENST00000610462 EPDR1Q9UM22 224 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 FAM106CPP0CH98 169 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 FANCD2OSQ96PS1 177 aa22.13■■□□□ 1.13
CSPG5-205ENST00000610462 PGPA6NDG6 321 aa22.12■■□□□ 1.13
CSPG5-205ENST00000610462 YPEL3P61236 119 aaPredicted RBP22.12■■□□□ 1.13
CSPG5-205ENST00000610462 LPAR2Q9HBW0 351 aa22.12■■□□□ 1.13
CSPG5-205ENST00000610462 SLC25A5P05141 298 aaKnown RBP22.11■■□□□ 1.13
CSPG5-205ENST00000610462 DNLZQ5SXM8 178 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 TMEM14CQ9P0S9 112 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 TOMM40O96008 361 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 HIST1H1BP16401 226 aaKnown RBP22.11■■□□□ 1.13
CSPG5-205ENST00000610462 GNG5P63218 68 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 IBA57Q5T440 356 aaKnown RBP22.11■■□□□ 1.13
CSPG5-205ENST00000610462 ZNF600Q6ZNG1 722 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 C1RLQ9NZP8 487 aa22.11■■□□□ 1.13
CSPG5-205ENST00000610462 Q8N9W7 124 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 ABCA1O95477 2261 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 TRAV34A0A0B4J273 112 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 SAA4P35542 130 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 TMEM183BQ1AE95 376 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 FAM120AOSQ5T036 256 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 BAGE2Q86Y30 109 aa22.1■■□□□ 1.13
CSPG5-205ENST00000610462 POLR3KQ9Y2Y1 108 aaPredicted RBP22.1■■□□□ 1.13
CSPG5-205ENST00000610462 TRAV30A0A087WSZ9 112 aa22.09■■□□□ 1.13
CSPG5-205ENST00000610462 BRS3P32247 399 aa22.09■■□□□ 1.13
CSPG5-205ENST00000610462 ZNF48Q96MX3 618 aaPredicted RBP22.09■■□□□ 1.13
CSPG5-205ENST00000610462 MFAP4P55083 255 aa22.08■■□□□ 1.13
CSPG5-205ENST00000610462 OR8I2Q8N0Y5 310 aa22.08■■□□□ 1.13
CSPG5-205ENST00000610462 NHLRC2Q8NBF2 726 aa22.08■■□□□ 1.13
CSPG5-205ENST00000610462 IGHV7-81A0A0B4J1V7 117 aa22.08■■□□□ 1.12
CSPG5-205ENST00000610462 FAM209BQ5JX69 171 aa22.08■■□□□ 1.12
CSPG5-205ENST00000610462 C5orf17Q8NAS9 161 aa22.08■■□□□ 1.12
CSPG5-205ENST00000610462 PRDM13Q9H4Q3 707 aa22.08■■□□□ 1.12
CSPG5-205ENST00000610462 KLF12Q9Y4X4 402 aa22.08■■□□□ 1.12
CSPG5-205ENST00000610462 EGR2P11161 476 aaPredicted RBP22.07■■□□□ 1.12
CSPG5-205ENST00000610462 ZNF491Q8N8L2 437 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 TMEM68Q96MH6 324 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 Q9H3A6 140 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 GNG7O60262 68 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 HIST1H1EP10412 219 aaKnown RBP22.07■■□□□ 1.12
CSPG5-205ENST00000610462 UBE2G1P62253 170 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 CCL19Q99731 98 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 SHANK2-AS3Q9BTD1 123 aa22.07■■□□□ 1.12
CSPG5-205ENST00000610462 NPFFO15130 113 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms