RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 DUTP33316 252 aaKnown RBP16.71■□□□□ 0.27
COL15A1-205ENST00000610452 BOD1L2Q8IYS8 172 aa16.71■□□□□ 0.27
COL15A1-205ENST00000610452 C21orf62Q9NYP8 219 aa16.71■□□□□ 0.27
COL15A1-205ENST00000610452 APC2O95996 2303 aa16.71■□□□□ 0.27
COL15A1-205ENST00000610452 IGHV3OR16-12A0A075B7B8 117 aa16.71■□□□□ 0.27
COL15A1-205ENST00000610452 SPTA1P02549 2419 aa16.71■□□□□ 0.27
COL15A1-205ENST00000610452 SRSF8Q9BRL6 282 aaKnown RBP16.71■□□□□ 0.26
COL15A1-205ENST00000610452 SAA2-SAA4A0A096LPE2 208 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 TRAV8-3A0A0A6YYJ7 113 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 YPEL1O60688 119 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 IGKV3-20P01619 116 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 SAA2P0DJI9 122 aaPredicted RBP16.7■□□□□ 0.26
COL15A1-205ENST00000610452 YPEL2Q96QA6 119 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 STRCP1A6NGW2 1772 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 ANKRD36A6QL64 1941 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 WBP1Q96G27 269 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 KIF26BQ2KJY2 2108 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 PPP1R27Q86WC6 154 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 TMEM158Q8WZ71 300 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 MYOFQ9NZM1 2061 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 TCRAP04437 139 aa16.7■□□□□ 0.26
COL15A1-205ENST00000610452 H3BMM0 161 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 UBE2WQ96B02 151 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 RNF115Q9Y4L5 304 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 TP53BP1Q12888 1972 aaPredicted RBP16.69■□□□□ 0.26
COL15A1-205ENST00000610452 MPDZO75970 2070 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 C21orf140B9A014 251 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 C1QTNF4Q9BXJ3 329 aa16.69■□□□□ 0.26
COL15A1-205ENST00000610452 TM4SF5O14894 197 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 FAM106AQ4KMX7 169 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 H3BMG7 143 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 RNASE4P34096 147 aaKnown RBP16.68■□□□□ 0.26
COL15A1-205ENST00000610452 IGHV3OR16-8A0A075B7F1 116 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 A0A0U1RRA0 63 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 MORN2Q502X0 79 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 PRSS57Q6UWY2 283 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 RNF125Q96EQ8 232 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 C8orf46Q8TAG6 207 aa16.68■□□□□ 0.26
COL15A1-205ENST00000610452 CELA3AP09093 270 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 GAGE2AQ6NT46 116 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 PVRIGQ6DKI7 326 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 PAX1P15863 534 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 NPC2P61916 151 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 NRN1LQ496H8 165 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 SP7Q8TDD2 431 aaPredicted RBP16.67■□□□□ 0.26
COL15A1-205ENST00000610452 PLEKHB2Q96CS7 222 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 NTF4P34130 210 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 S100A7L2Q5SY68 101 aa16.67■□□□□ 0.26
COL15A1-205ENST00000610452 SAP30O75446 220 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 ZNF688P0C7X2 276 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 DEFB125Q8N687 156 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 SLC25A39Q9BZJ4 359 aaPredicted RBP16.66■□□□□ 0.26
COL15A1-205ENST00000610452 GREB1LQ9C091 1923 aaPredicted RBP16.66■□□□□ 0.26
COL15A1-205ENST00000610452 SNRPD3P62318 126 aaKnown RBP16.66■□□□□ 0.26
COL15A1-205ENST00000610452 PLXNB2O15031 1838 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 TRAV40A0A0B4J280 105 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 A0A0G2JRQ6 117 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 VGLL1Q99990 258 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 SPANXDQ9BXN6 97 aa16.66■□□□□ 0.26
COL15A1-205ENST00000610452 GFRA3O60609 400 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 CD28P10747 220 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 COA6Q5JTJ3 125 aaKnown RBP16.65■□□□□ 0.26
COL15A1-205ENST00000610452 RNF144BQ7Z419 303 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 LIME1Q9H400 295 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 ARID2Q68CP9 1835 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 FCN3O75636 299 aa16.65■□□□□ 0.26
COL15A1-205ENST00000610452 AMN1Q8IY45 258 aa16.64■□□□□ 0.26
COL15A1-205ENST00000610452 EXOC3-AS1Q8N2X6 119 aa16.64■□□□□ 0.26
COL15A1-205ENST00000610452 GHRHP01286 108 aa16.64■□□□□ 0.25
COL15A1-205ENST00000610452 TRACP01848 142 aa16.64■□□□□ 0.25
COL15A1-205ENST00000610452 VOPP1Q96AW1 172 aa16.64■□□□□ 0.25
COL15A1-205ENST00000610452 SLC50A1Q9BRV3 221 aa16.64■□□□□ 0.25
COL15A1-205ENST00000610452 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
COL15A1-205ENST00000610452 PRB4P10163 310 aaPredicted RBP16.64■□□□□ 0.25
COL15A1-205ENST00000610452 NABP1Q96AH0 204 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 PRR33A8MZF0 331 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 Q6ZRM9 215 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 IGHV1-24A0A0C4DH33 117 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 TMEM190Q8WZ59 177 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 GFRA4Q9GZZ7 299 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 IGKV1-27A0A075B6S5 117 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 SMKR1H3BMG3 65 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 PIMREGQ9BSJ6 248 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 PSG7Q13046 419 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 MORN3Q6PF18 240 aaPredicted RBP16.63■□□□□ 0.25
COL15A1-205ENST00000610452 FAM216BQ8N7L0 139 aa16.63■□□□□ 0.25
COL15A1-205ENST00000610452 TEX48A0A1B0GUV7 120 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 ZNF726P1Q15940 193 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 C15orf62A8K5M9 175 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 FAM201AQ5SY85 155 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 AMTNQ6UX39 209 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 LINC00479Q96M42 142 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 CHCHD2Q9Y6H1 151 aaPredicted RBP16.62■□□□□ 0.25
COL15A1-205ENST00000610452 LOC102723996A0A087X1L8 192 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 KLK10O43240 276 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 PMVKQ15126 192 aa16.62■□□□□ 0.25
COL15A1-205ENST00000610452 SHANK3Q9BYB0 1731 aa16.61■□□□□ 0.25
COL15A1-205ENST00000610452 CFPP27918 469 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms