RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 GFRA3O60609 400 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 PRTN3P24158 256 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 SIGLEC15Q6ZMC9 328 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 COL4A1P02462 1669 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 CXCL1P09341 107 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF562Q6V9R5 426 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 FAM90A1Q86YD7 464 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF48Q96MX3 618 aaPredicted RBP10.87□□□□□ -0.67
USP6NL-205ENST00000609104 PRR31Q5SQ13 230 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 LSM4Q9Y4Z0 139 aaKnown RBP10.87□□□□□ -0.67
USP6NL-205ENST00000609104 C1orf122Q6ZSJ8 110 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 VSIRQ9H7M9 311 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 TSC2P49815 1807 aa10.87□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF124Q15973 351 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 NR2C2APQ86WQ0 139 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 CCL1P22362 96 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 HSD52Q0P140 79 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 WBP1Q96G27 269 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 A0A0G2JMZ2 1700 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 LRRC37AA6NMS7 1700 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 FXYD7P58549 80 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 A0A087WV48 116 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 PPBPP02775 128 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 EXOC3-AS1Q8N2X6 119 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 TMEM133Q9H2Q1 129 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 NAPSAO96009 420 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 SEC11AP67812 179 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 GAGE2BQ13066 116 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 TMEM249Q2WGJ8 235 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 GAGE2EQ4V326 116 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 CHCHD5Q9BSY4 110 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 GAGE2DQ9UEU5 116 aa10.86□□□□□ -0.67
USP6NL-205ENST00000609104 DUSP14O95147 198 aaKnown RBP10.85□□□□□ -0.67
USP6NL-205ENST00000609104 TIMP3P35625 211 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 LY6G6FQ5SQ64 297 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 CRIM1Q9NZV1 1036 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 PAX8Q06710 450 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 TRAV8-1A0A0A6YYK1 113 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 CDK2AP2O75956 126 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 LYNX1G3V0Z9 82 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 LYNX1P0DP58 116 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 C3orf36Q3SXR2 165 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 SPTA1P02549 2419 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 A0A087X0K7 114 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 OCIAD2Q56VL3 154 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 LINC00114Q6XXX2 140 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 IMMP1LQ96LU5 166 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 TOMM40O96008 361 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 A0A1W2PRE2 83 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 PMS2P5A8MQ11 134 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 NCR2O95944 276 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 ARHGAP21Q5T5U3 1957 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 TNFSF13O75888 250 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF319Q9P2F9 582 aa10.85□□□□□ -0.67
USP6NL-205ENST00000609104 D6R8Y8 96 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 LTBRP36941 435 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 RPL15P61313 204 aaKnown RBP10.84□□□□□ -0.67
USP6NL-205ENST00000609104 NRN1LQ496H8 165 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 H0YIZ8 118 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 NSUN5P1Q3KNT7 163 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 HIST3H2BBQ8N257 126 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 JPT2Q9H910 190 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 LGALS1P09382 135 aaKnown RBP10.84□□□□□ -0.67
USP6NL-205ENST00000609104 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 TEX38Q6PEX7 206 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 ZNF474Q6S9Z5 364 aaPredicted RBP10.84□□□□□ -0.67
USP6NL-205ENST00000609104 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 PRSS22Q9GZN4 317 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 A0A1W2PR77 199 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
USP6NL-205ENST00000609104 MORN3Q6PF18 240 aaPredicted RBP10.84□□□□□ -0.67
USP6NL-205ENST00000609104 DUTP33316 252 aaKnown RBP10.83□□□□□ -0.68
USP6NL-205ENST00000609104 PAX4O43316 350 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 NRXN2Q9P2S2 1712 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 DTX2Q86UW9 622 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 TNFRSF6BO95407 300 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 AMBPP02760 352 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 BCL6BQ8N143 479 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-205ENST00000609104 TRGV11A0A075B6L2 103 aa10.83□□□□□ -0.68
USP6NL-205ENST00000609104 MRPS18CQ9Y3D5 142 aaKnown RBP10.83□□□□□ -0.68
USP6NL-205ENST00000609104 IGKV1-9A0A0C4DH69 117 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 SCRT1Q9BWW7 348 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 PRDM6Q9NQX0 595 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 LURAP1LQ8IV03 231 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 EML6Q6ZMW3 1958 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 MLNRO43193 412 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 CEACAM1P13688 526 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 TCF20Q9UGU0 1960 aaKnown RBP10.82□□□□□ -0.68
USP6NL-205ENST00000609104 CSRP3P50461 194 aa10.82□□□□□ -0.68
USP6NL-205ENST00000609104 SLC25A39Q9BZJ4 359 aaPredicted RBP10.82□□□□□ -0.68
USP6NL-205ENST00000609104 GTSF1LQ9H1H1 148 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms