RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 SLAMF6Q96DU3 332 aa0.07□□□□□ -2.4
ITGB5-213ENST00000608945 PSTPIP2Q9H939 334 aa0.07□□□□□ -2.4
ITGB5-213ENST00000608945 CHCHD2Q9Y6H1 151 aaPredicted RBP0.07□□□□□ -2.4
ITGB5-213ENST00000608945 KMT2CQ8NEZ4 4911 aaKnown RBP0.07□□□□□ -2.4
ITGB5-213ENST00000608945 FREM1Q5H8C1 2179 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 ZFHX2Q9C0A1 2572 aaPredicted RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 hCG_1818297A0A087WSY0 165 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 TRGV10A0A0A0MS01 117 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 A8MT66 165 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 F8W1H4 67 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 TIMM17BO60830 172 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 IFNA5P01569 189 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 SERPINE1P05121 402 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 SERPINA6P08185 405 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 DYNLT1P63172 113 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 COTL1Q14019 142 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 NUMA1Q14980 2115 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 C4orf22Q6V702 233 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 C8orf76Q96K31 380 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 LINC00052Q96N35 136 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 YPEL2Q96QA6 119 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 LLPHQ9BRT6 129 aaKnown RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 PRADC1Q9BSG0 188 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 TMEM138Q9NPI0 162 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 TVP23BQ9NYZ1 205 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 UBAP1Q9NZ09 502 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 JPT1Q9UK76 154 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 NOSIPQ9Y314 301 aaKnown RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 LY96Q9Y6Y9 160 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 GREB1Q4ZG55 1949 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 PEAK1Q9H792 1746 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 BPTFQ12830 3046 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 ARFGEF3Q5TH69 2177 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 INTS1Q8N201 2190 aaKnown RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 USP24Q9UPU5 2620 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 PCDH15Q96QU1 1955 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 TNRC6BQ9UPQ9 1833 aaKnown RBP0.06□□□□□ -2.4
ITGB5-213ENST00000608945 MAP3K5Q99683 1374 aa0.06□□□□□ -2.4
ITGB5-213ENST00000608945 RYR2Q92736 4967 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 WRNQ14191 1432 aaPredicted RBP eCLIP0.05□□□□□ -2.4
ITGB5-213ENST00000608945 NSD1Q96L73 2696 aaPredicted RBP0.05□□□□□ -2.4
ITGB5-213ENST00000608945 UBR4Q5T4S7 5183 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 TRAV10A0A0B4J240 114 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 FAM236DA0A1B0GTK5 79 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 SMIM9A6NGZ8 99 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 CLDN24A6NM45 220 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 A8MWV9 139 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 CHP2O43745 196 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 CD2P06729 351 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 SMIM17P0DL12 118 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 FAM236CP0DP71 79 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 OMPP47874 163 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 ZNF137PP52743 207 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 NKX2-5P52952 324 aaPredicted RBP0.05□□□□□ -2.4
ITGB5-213ENST00000608945 MYL5Q02045 173 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 KRR1Q13601 381 aaKnown RBP0.05□□□□□ -2.4
ITGB5-213ENST00000608945 IAH1Q2TAA2 248 aaPredicted RBP0.05□□□□□ -2.4
ITGB5-213ENST00000608945 SPATA45Q537H7 98 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 Q6Q795 121 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 ATOH7Q8N100 152 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 CLDN22Q8N7P3 220 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 OR52L1Q8NGH7 329 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 OR5D14Q8NGL3 314 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 SLC25A40Q8TBP6 338 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 WFDC5Q8TCV5 224 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 LYSMD1Q96S90 227 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 TRIM4Q9C037 500 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 RNF122Q9H9V4 155 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 IDI2-AS1Q9NZ38 188 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 PCTPQ9UKL6 214 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 RNF11Q9Y3C5 154 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 BRWD1Q9NSI6 2320 aa0.05□□□□□ -2.4
ITGB5-213ENST00000608945 NEO1Q92859 1461 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 ASH1LQ9NR48 2969 aaKnown RBP0.04□□□□□ -2.4
ITGB5-213ENST00000608945 MED1Q15648 1581 aaPredicted RBP0.04□□□□□ -2.4
ITGB5-213ENST00000608945 K7EIL1 84 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 ERC2-IT1O76042 136 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 CNIH1O95406 144 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 C8GP07360 202 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 COX7CP15954 63 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 SPINT3P49223 89 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 C12orf74Q32Q52 190 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 C6orf52Q5T4I8 152 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 BCL2L15Q5TBC7 163 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 SPINK6Q6UWN8 80 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 ZNF833PQ6ZTB9 187 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 GRINAQ7Z429 371 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 ADAT3Q96EY9 351 aaPredicted RBP0.04□□□□□ -2.4
ITGB5-213ENST00000608945 SLC25A21Q9BQT8 299 aaPredicted RBP0.04□□□□□ -2.4
ITGB5-213ENST00000608945 WFDC10AQ9H1F0 79 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 HSPB8Q9UJY1 196 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 E9PCH4 1651 aa0.04□□□□□ -2.4
ITGB5-213ENST00000608945 SONP18583 2426 aaKnown RBP0.04□□□□□ -2.4
ITGB5-213ENST00000608945 SNAPC4Q5SXM2 1469 aa0.03□□□□□ -2.4
ITGB5-213ENST00000608945 HEATR5BQ9P2D3 2071 aa0.03□□□□□ -2.4
ITGB5-213ENST00000608945 TRBV30A0A0K0K1B3 111 aa0.03□□□□□ -2.4
ITGB5-213ENST00000608945 hADV38S2A0JD32 116 aa0.03□□□□□ -2.4
ITGB5-213ENST00000608945 E7EUB6 86 aa0.03□□□□□ -2.4
ITGB5-213ENST00000608945 C17orf112F2Z3M2 114 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms