RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CCL4L1Q8NHW4 92 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 PPP1R35Q8TAP8 253 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 CACNG8Q8WXS5 425 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 RNF183Q96D59 192 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SNRNP40Q96DI7 357 aaKnown RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC25A33Q9BSK2 321 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 DEPPQ9NTK1 212 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 CLCF1Q9UBD9 225 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 MRPS17Q9Y2R5 130 aaKnown RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 MPC1Q9Y5U8 109 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 U3KQK5 164 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 LTBP2Q14767 1821 aa3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 TET2Q6N021 2002 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P50-201ENST00000605814 DYSFO75923 2080 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 UNC13CQ8NB66 2214 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 IGLV3-12A0A075B6K2 115 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CENPVL3A0A0U1RRI6 287 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 SPAARA0A1B0GVQ0 90 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE12JA6NER3 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 LILRA5A6NI73 299 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 HIGD1CA8MV81 97 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GGTLC3B5MD39 225 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 RHODO00212 210 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE7O76087 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 APOHP02749 345 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CLEC3BP05452 202 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CELA2AP08217 269 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 NHLRC4P0CG21 123 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE12FP0CL80 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE12GP0CL81 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE12IP0CL82 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 EVI2AP22794 236 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 OTX2P32243 289 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 UQCRFS1P47985 274 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPL30P62888 115 aaKnown RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 HERV-K104P63124 156 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 PLGLB1Q02325 96 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 SRYQ05066 204 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 GAGE4Q13068 117 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 FXYD3Q14802 87 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 PSG5Q15238 335 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 PRR30Q53SZ7 412 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CARD17Q5XLA6 110 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 Q6AWC8 147 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZFAND6Q6FIF0 208 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 Q6ZUT4 128 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 PPP1R32Q7Z5V6 425 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 C17orf82Q86X59 251 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 Q8IYB0 196 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CEND1Q8N111 149 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 ABHD12Q8N2K0 398 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 MRPL43Q8N983 215 aaKnown RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR10X1Q8NGY0 326 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 IL1F10Q8WWZ1 152 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 RND1Q92730 232 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 FAM167A-AS1Q96KT0 104 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 HARBI1Q96MB7 349 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 NABP2Q9BQ15 211 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC25A2Q9BXI2 301 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 C1QTNF4Q9BXJ3 329 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 OR2H1Q9GZK4 316 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM126AQ9H061 195 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 SERTAD4Q9NUC0 356 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 KCNS2Q9ULS6 477 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 POLDIP2Q9Y2S7 368 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 AMMECR1Q9Y4X0 333 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 PTPRSQ13332 1948 aa3.26□□□□□ -1.89
HMGB1P50-201ENST00000605814 CACNA1DQ01668 2161 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 HEATR1Q9H583 2144 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 A0A087WX48 190 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 KBTBD11-OT1A0A1B0GTJ5 212 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 A0A1W2PQM1 296 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 TCRBV4S1A1TA0A5B7 111 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 TMEM8BA6NDV4 472 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 OOEPA6NGQ2 149 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 SH2D7A6NKC9 451 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF785A8K8V0 405 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 C17orf98A8MV24 154 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 INS-IGF2F8WCM5 200 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 H3BML4 177 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC31A1O15431 190 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 NDUFS7O75251 213 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 CER1O95813 267 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 CA1P00915 261 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 MGST1P10620 155 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ZNF32P17041 273 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 WT1P19544 449 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 ASIPP42127 132 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 KIR2DS2P43631 304 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 HSPE1P61604 102 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 GNG3P63215 75 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 SLC35B1P78383 322 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 PAX8Q06710 450 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RIGQ13278 110 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 MRPL23Q16540 153 aaKnown RBP3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 POU2AF1Q16633 256 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 RRN3P1Q2M238 152 aa3.25□□□□□ -1.89
HMGB1P50-201ENST00000605814 C12orf74Q32Q52 190 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 1467.2 ms