RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 IGHV3OR16-13A0A075B7E8 117 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 IGHV3-74A0A0B4J1X5 117 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 POLR2GP62487 172 aaKnown RBP eCLIP14.3□□□□□ -0.12
SRSF4-206ENST00000605204 RPL11P62913 178 aaKnown RBP14.3□□□□□ -0.12
SRSF4-206ENST00000605204 OR8G2PQ6IF36 304 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 ENKURQ8TC29 256 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 SMIM8Q96KF7 97 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 CITED4Q96RK1 184 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 TRGV9Q99603 122 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 RABAC1Q9UI14 185 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 U3KQE9 123 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 TENM2Q9NT68 2774 aa14.3□□□□□ -0.12
SRSF4-206ENST00000605204 KIR2DL5BA0A0G2JN68 375 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 KIR2DL5BA0A0G2JPC4 375 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 DNASE2O00115 360 aaPredicted RBP14.29□□□□□ -0.12
SRSF4-206ENST00000605204 APOHP02749 345 aaPredicted RBP14.29□□□□□ -0.12
SRSF4-206ENST00000605204 PSG1P11464 419 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 KIR2DL5AQ8N109 375 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 ZBTB8BQ8NAP8 495 aaPredicted RBP14.29□□□□□ -0.12
SRSF4-206ENST00000605204 KIR2DL5BQ8NHK3 375 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 RNF125Q96EQ8 232 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 MS4A6AQ9H2W1 248 aa14.29□□□□□ -0.12
SRSF4-206ENST00000605204 SNRPGP15A8MWD9 76 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 PRSS46E5RG02 174 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 UBE2CO00762 179 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 SSSCA1O60232 199 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 USF2Q15853 346 aaPredicted RBP14.28□□□□□ -0.12
SRSF4-206ENST00000605204 THAP8Q8NA92 274 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 PSENENQ9NZ42 101 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 UBQLN2Q9UHD9 624 aa14.28□□□□□ -0.12
SRSF4-206ENST00000605204 IGKV3-7A0A075B6H7 116 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 IGHV3-66A0A0C4DH42 116 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 TSC22D2O75157 780 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 IL5P05113 134 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 S100A7P31151 101 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 TFPI2P48307 235 aa14.27□□□□□ -0.12
SRSF4-206ENST00000605204 C12orf45Q8N5I9 185 aaPredicted RBP14.27□□□□□ -0.12
SRSF4-206ENST00000605204 IGKV1D-37A0A075B6S9 117 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 FNDC10F2Z333 226 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 C3orf84H3BNL1 204 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 H3BP45 60 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 DEFA1P59665 94 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 DEFA3P59666 94 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 C16orf54Q6UWD8 224 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 LILRB2Q8N423 598 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 GBGT1Q8N5D6 347 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 GLMPQ8WWB7 406 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 MAP6D1Q9H9H5 199 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 GPN1Q9HCN4 374 aaPredicted RBP14.26□□□□□ -0.13
SRSF4-206ENST00000605204 GSKIPQ9P0R6 139 aa14.26□□□□□ -0.13
SRSF4-206ENST00000605204 BUB3O43684 328 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 SCGB1D2O95969 90 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 AKR1C1Q04828 323 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 ACOT7LQ6ZUV0 252 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 Q6ZWC4 215 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 SEC22CQ9BRL7 303 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 SLC45A2Q9UMX9 530 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 TP53TG1Q9Y2A0 90 aa14.25□□□□□ -0.13
SRSF4-206ENST00000605204 CSMD3Q7Z407 3707 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 PRAF2O60831 178 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 C1orf194Q5T5A4 169 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 TMEM14EPQ6UXP3 125 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 TMEM144Q7Z5S9 345 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 STPG3Q8N7X2 389 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 STXBP6Q8NFX7 210 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 SEPSECSQ9HD40 501 aaKnown RBP14.24□□□□□ -0.13
SRSF4-206ENST00000605204 FBXL17Q9UF56 701 aa14.24□□□□□ -0.13
SRSF4-206ENST00000605204 C5orf51A6NDU8 294 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 K7EQG2 157 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 DLK1P80370 383 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 ZNF90Q03938 601 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 GSG1LQ6UXU4 331 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 OR10P1Q8NGE3 313 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 MUC7Q8TAX7 377 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 C2orf50Q96LR7 162 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 PBDC1Q9BVG4 233 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 EDA2RQ9HAV5 297 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 RCL1Q9Y2P8 373 aaKnown RBP14.23□□□□□ -0.13
SRSF4-206ENST00000605204 HYDINQ4G0P3 5121 aa14.23□□□□□ -0.13
SRSF4-206ENST00000605204 IGKV1OR2-108A0A075B7D4 117 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 FAM25EA8MYX2 175 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 L7N2F9 121 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 MBPP02686 304 aaPredicted RBP14.22□□□□□ -0.13
SRSF4-206ENST00000605204 PVALBP20472 110 aaPredicted RBP14.22□□□□□ -0.13
SRSF4-206ENST00000605204 VAMP2P63027 116 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 SAMD13Q5VXD3 122 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 WFDC3Q8IUB2 231 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 BPIFCQ8NFQ6 507 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 DCANP1Q8TF63 244 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 GGACTQ9BVM4 153 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 MGAT4CQ9UBM8 478 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 CCSO14618 274 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 PAX9P55771 341 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 LYZP61626 148 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 SELENOTP62341 195 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 SIGLEC15Q6ZMC9 328 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 APRG1Q8IVJ8 170 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 NRN1Q9NPD7 142 aa14.22□□□□□ -0.13
SRSF4-206ENST00000605204 C7orf66A4D0T2 115 aa14.21□□□□□ -0.14
SRSF4-206ENST00000605204 PMS2P5A8MQ11 134 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms