RNA–Protein interactions for RNA: ENST00000602848.5

PPFIA3-211, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-211ENST00000602848 STXBP6Q8NFX7 210 aa17.45■□□□□ 0.38
PPFIA3-211ENST00000602848 ATP6V0BQ99437 205 aa17.45■□□□□ 0.38
PPFIA3-211ENST00000602848 ITPR3Q14573 2671 aa17.45■□□□□ 0.38
PPFIA3-211ENST00000602848 OR2J3O76001 311 aa17.44■□□□□ 0.38
PPFIA3-211ENST00000602848 PSG1P11464 419 aa17.44■□□□□ 0.38
PPFIA3-211ENST00000602848 CD81P60033 236 aa17.44■□□□□ 0.38
PPFIA3-211ENST00000602848 S100A7AQ86SG5 101 aa17.44■□□□□ 0.38
PPFIA3-211ENST00000602848 H3BUA1 57 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 PDE6DO43924 150 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 MDFIC2A0A1B0GVS7 189 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 SH2D7A6NKC9 451 aaPredicted RBP17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 G3V318 75 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 FAM74A3Q4VXF1 159 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 CLRN3Q8NCR9 226 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 OR51G1Q8NGK1 321 aa17.43■□□□□ 0.38
PPFIA3-211ENST00000602848 C11orf94C9JXX5 98 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 F6UZH7 168 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 IGHV4-59P01825 116 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 ORM2P19652 201 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 RHOGP84095 191 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 Q56UQ5 140 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 C9orf152Q5JTZ5 239 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 LINC00305Q7Z4B0 112 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 OR1B1Q8NGR6 318 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 FAM167A-AS1Q96KT0 104 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 GSX1Q9H4S2 264 aaPredicted RBP17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 ZNF355PQ9NSJ1 428 aa17.42■□□□□ 0.38
PPFIA3-211ENST00000602848 FAM223BA6NKX1 122 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 AP4M1O00189 453 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 FAM90A2PQ658T7 463 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 FAM223AQ8IWN6 122 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 CIARTQ8N365 385 aaPredicted RBP17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 OR4F5Q8NH21 305 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 Q8WTZ3 238 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 OR4F4Q96R69 305 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 SLC25A2Q9BXI2 301 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 DOK5Q9P104 306 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 HIGD1AQ9Y241 93 aa17.41■□□□□ 0.38
PPFIA3-211ENST00000602848 F8W735 103 aaPredicted RBP17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 OR7C2O60412 319 aa17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 ATRAIDQ6UW56 229 aa17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 ZNF502Q8TBZ5 544 aa17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 NIPSNAP3BQ9BS92 247 aa17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 MRPL27Q9P0M9 148 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 VPREB3Q9UKI3 123 aa17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 ZNF469Q96JG9 3925 aaPredicted RBP17.4■□□□□ 0.38
PPFIA3-211ENST00000602848 TRBV7-1A0A0A6YYK4 115 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 WI2-2373I1.2A0A1W2PRP0 233 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 SCO1O75880 301 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 OR2C1O95371 312 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 C15orf32Q32M92 178 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 CST9LP1Q5W188 147 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 OR5AU1Q8NGC0 362 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 EEF1AKMT3Q96AZ1 226 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 ZNF503Q96F45 646 aa17.39■□□□□ 0.38
PPFIA3-211ENST00000602848 A0A1W2PRE2 83 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 FAM74A7A6NL05 159 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 H3BQ15 152 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 SMAD7O15105 426 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 PPIFP30405 207 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 S100A7P31151 101 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 CEBPGP53567 150 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 UBE2G2P60604 165 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 BLCAPP62952 87 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 ATP5G2Q06055 141 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 ZNF491Q8N8L2 437 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 PAXXQ9BUH6 204 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 OR51M1Q9H341 326 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 RNF24Q9Y225 148 aa17.38■□□□□ 0.37
PPFIA3-211ENST00000602848 CELSR1Q9NYQ6 3014 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 NUPL2O15504 423 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 CD5LO43866 347 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 CTSGP08311 255 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 LYZP61626 148 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 PNRC1Q12796 327 aaPredicted RBP17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 RHEBQ15382 184 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 TVP23CQ96ET8 276 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 UHRF2Q96PU4 802 aa17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
PPFIA3-211ENST00000602848 TRAV5A0A0B4J249 113 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 MORN5Q5VZ52 161 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 RNF125Q96EQ8 232 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 USMG5Q96IX5 58 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 PUS1Q9Y606 427 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 BTN1A1Q13410 526 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 TMEM86BQ8N661 226 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 TMEM14CQ9P0S9 112 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 YTHDF2Q9Y5A9 579 aaKnown RBP17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 S4R3C0 116 aa17.36■□□□□ 0.37
PPFIA3-211ENST00000602848 ABCA1O95477 2261 aa17.35■□□□□ 0.37
PPFIA3-211ENST00000602848 ZNF727A8MUV8 499 aa17.35■□□□□ 0.37
PPFIA3-211ENST00000602848 B4DEV8 164 aa17.35■□□□□ 0.37
PPFIA3-211ENST00000602848 UBE2L3P68036 154 aaKnown RBP17.35■□□□□ 0.37
PPFIA3-211ENST00000602848 SLC25A39Q9BZJ4 359 aaPredicted RBP17.35■□□□□ 0.37
PPFIA3-211ENST00000602848 M0R036 132 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 ATP5G3P48201 142 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 ZNF600Q6ZNG1 722 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 TMEM190Q8WZ59 177 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 SHANK2-AS3Q9BTD1 123 aa17.34■□□□□ 0.37
PPFIA3-211ENST00000602848 NAT8Q9UHE5 227 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms