RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
RNF40-212ENST00000602784 CST7O76096 145 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 CD5P06127 495 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 GP9P14770 177 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 HBG1P69891 147 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 HBG2P69892 147 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 ZNF90Q03938 601 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 BTNL8Q6UX41 500 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 RHPN1-AS1Q9BWJ2 59 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 OR5AC2Q9NZP5 309 aa10.47□□□□□ -0.73
RNF40-212ENST00000602784 A0A1W2PS18 150 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 SMCO3A2RU48 225 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 IZUMO1RA6ND01 250 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 ZNF785A8K8V0 405 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 PRB2P02812 416 aaPredicted RBP10.46□□□□□ -0.73
RNF40-212ENST00000602784 IL4P05112 153 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 GIPP09681 153 aaPredicted RBP10.46□□□□□ -0.73
RNF40-212ENST00000602784 LYL1P12980 280 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 SELENOTP62341 195 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 ATP6V1FQ16864 119 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 VWC2Q2TAL6 325 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 LAMTOR1Q6IAA8 161 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 TEPPQ6URK8 271 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 TMEM61Q8N0U2 210 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 NARS2Q96I59 477 aaKnown RBP10.46□□□□□ -0.73
RNF40-212ENST00000602784 TMEM231Q9H6L2 316 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 LSM4Q9Y4Z0 139 aaKnown RBP10.46□□□□□ -0.73
RNF40-212ENST00000602784 U3KQE9 123 aa10.46□□□□□ -0.73
RNF40-212ENST00000602784 K7EIL1 84 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 TSPAN4O14817 238 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 RAP2BP61225 183 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 BAXQ07812 192 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 FGL1Q08830 312 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 RBPMS2Q6ZRY4 209 aaKnown RBP10.45□□□□□ -0.74
RNF40-212ENST00000602784 TMEM217Q8N7C4 229 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 RNF125Q96EQ8 232 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 PRR25Q96S07 402 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 PFDN2Q9UHV9 154 aa10.45□□□□□ -0.74
RNF40-212ENST00000602784 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
RNF40-212ENST00000602784 HNRNPCP07910 306 aaKnown RBP eCLIP10.44□□□□□ -0.74
RNF40-212ENST00000602784 NUP62P37198 522 aaPredicted RBP10.44□□□□□ -0.74
RNF40-212ENST00000602784 EWSR1Q01844 656 aaKnown RBP eCLIP10.44□□□□□ -0.74
RNF40-212ENST00000602784 USF2Q15853 346 aaPredicted RBP10.44□□□□□ -0.74
RNF40-212ENST00000602784 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 CYP2G1PQ6ZSU1 146 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 LILRB2Q8N423 598 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 THAP6Q8TBB0 222 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 ST8SIA2Q92186 375 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 RNF2Q99496 336 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 UQCC1Q9NVA1 299 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 RABAC1Q9UI14 185 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
RNF40-212ENST00000602784 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 EIF2B2P49770 351 aaKnown RBP10.43□□□□□ -0.74
RNF40-212ENST00000602784 NHLH2Q02577 135 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 OR2F1Q13607 317 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 RAB31Q13636 194 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 GTSCR1Q86UQ5 136 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 CHAC2Q8WUX2 184 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 GRAMD2BQ96HH9 432 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 SPAG8Q99932 426 aaPredicted RBP10.43□□□□□ -0.74
RNF40-212ENST00000602784 MBD2Q9UBB5 411 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 WDR83OSQ9Y284 106 aa10.43□□□□□ -0.74
RNF40-212ENST00000602784 IGHV3OR16-13A0A075B7E8 117 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 IGHV3-74A0A0B4J1X5 117 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 RPL12P30050 165 aaKnown RBP10.42□□□□□ -0.74
RNF40-212ENST00000602784 S100A7P31151 101 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 PLP1P60201 277 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 LYZP61626 148 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 TMEM182Q6ZP80 229 aaPredicted RBP10.42□□□□□ -0.74
RNF40-212ENST00000602784 ZNF546Q86UE3 836 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 Q8N1Y9 231 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 OR5C1Q8NGR4 320 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 MRAPQ8TCY5 172 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 PBDC1Q9BVG4 233 aa10.42□□□□□ -0.74
RNF40-212ENST00000602784 AGPAT2O15120 278 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 BUB3O43684 328 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 MPDU1O75352 247 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 DFFBO76075 338 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 C1orf194Q5T5A4 169 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 PXDC1Q5TGL8 231 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 C16orf54Q6UWD8 224 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 TCF24Q7RTU0 167 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 MGST2Q99735 147 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
RNF40-212ENST00000602784 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 HELTA6NFD8 242 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 OR4C46A6NHA9 309 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 LINC00869P0C866 280 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 GATA2P23769 480 aaPredicted RBP10.4□□□□□ -0.74
RNF40-212ENST00000602784 CAMLGP49069 296 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 AP2S1P53680 142 aaPredicted RBP10.4□□□□□ -0.74
RNF40-212ENST00000602784 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 Q6ZNX1 250 aa10.4□□□□□ -0.74
RNF40-212ENST00000602784 S100A7AQ86SG5 101 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms