RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 IL22RA2Q969J5 263 aa9.47□□□□□ -0.89
RPS28-204ENST00000602140 PRRT1Q99946 306 aa9.47□□□□□ -0.89
RPS28-204ENST00000602140 SEPSECSQ9HD40 501 aaKnown RBP9.47□□□□□ -0.89
RPS28-204ENST00000602140 CACFD1Q9UGQ2 172 aa9.47□□□□□ -0.89
RPS28-204ENST00000602140 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
RPS28-204ENST00000602140 DNAH6Q9C0G6 4158 aa9.47□□□□□ -0.89
RPS28-204ENST00000602140 CTDSPLO15194 276 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 HLA-DRB4P13762 266 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 CLVS1Q8IUQ0 354 aaPredicted RBP9.46□□□□□ -0.9
RPS28-204ENST00000602140 LGI3Q8N145 548 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 DTD1Q8TEA8 209 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 RNF125Q96EQ8 232 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 DIRAS2Q96HU8 199 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 PBDC1Q9BVG4 233 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 RBKSQ9H477 322 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 U3KQ87 197 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 HLA-DRB4X5D2U9 266 aa9.46□□□□□ -0.9
RPS28-204ENST00000602140 ANKRD20A5PA0PJZ0 165 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 IGKV3-20P01619 116 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 AMBPP02760 352 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 NKX2-1P43699 371 aaPredicted RBP9.45□□□□□ -0.9
RPS28-204ENST00000602140 CCR6P51684 374 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 DEFB1P60022 68 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 KLF9Q13886 244 aaPredicted RBP9.45□□□□□ -0.9
RPS28-204ENST00000602140 SMCO1Q147U7 214 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 GDF5OSQ5U4N7 250 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 SCRT1Q9BWW7 348 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 HSPB7Q9UBY9 170 aa9.45□□□□□ -0.9
RPS28-204ENST00000602140 A0A0B4J2A0 478 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 ZFP92A6NM28 416 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 AKR1C4P17516 323 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 NUP62P37198 522 aaPredicted RBP9.44□□□□□ -0.9
RPS28-204ENST00000602140 ALDH3B2P48448 385 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 FXYD7P58549 80 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 ZNF90Q03938 601 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 GAMTQ14353 236 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 LINC00052Q96N35 136 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 NDUFAF3Q9BU61 184 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 MRPS26Q9BYN8 205 aaKnown RBP9.44□□□□□ -0.9
RPS28-204ENST00000602140 WDR12Q9GZL7 423 aaKnown RBP9.44□□□□□ -0.9
RPS28-204ENST00000602140 RABL2AQ9UBK7 228 aaPredicted RBP9.44□□□□□ -0.9
RPS28-204ENST00000602140 SHPKQ9UHJ6 478 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 PFDN2Q9UHV9 154 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 DNAH2Q9P225 4427 aa9.44□□□□□ -0.9
RPS28-204ENST00000602140 IGHV3OR16-12A0A075B7B8 117 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 P0DMU3 169 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 FAM231AP0DMU4 169 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 FAM231CP0DMU5 169 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 EMP1P54849 157 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 SUPT4H1P63272 117 aaKnown RBP9.43□□□□□ -0.9
RPS28-204ENST00000602140 OR8G2PQ6IF36 304 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 GSG1LQ6UXU4 331 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 ZNF705AQ6ZN79 300 aaPredicted RBP9.43□□□□□ -0.9
RPS28-204ENST00000602140 LINC00336Q6ZUF6 198 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 POM121L12Q8N7R1 296 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 NEU1Q99519 415 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 MCUBQ9NWR8 336 aa9.43□□□□□ -0.9
RPS28-204ENST00000602140 FAT2Q9NYQ8 4349 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 IGKV1D-37A0A075B6S9 117 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 ZNF705FA8MVS1 300 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 SPART-AS1P0CW21 52 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 ID1P41134 155 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 ATP5IP56385 69 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 LYZP61626 148 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 OR4B1Q8NGF8 309 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 OR1S1Q8NH92 325 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 COQ8AQ8NI60 647 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 DYNC2LI1Q8TCX1 351 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 SLC35E1Q96K37 410 aa9.42□□□□□ -0.9
RPS28-204ENST00000602140 SAV1Q9H4B6 383 aaPredicted RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 CCDC59Q9P031 241 aaKnown RBP9.42□□□□□ -0.9
RPS28-204ENST00000602140 TMEM189A5PLL7 270 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 SMIM9A6NGZ8 99 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 M0R2N4 97 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 FABP1P07148 127 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 ANXA3P12429 323 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 PSMB3P49720 205 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 SRPXP78539 464 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 OR2F1Q13607 317 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 C1orf194Q5T5A4 169 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
RPS28-204ENST00000602140 RSL24D1Q9UHA3 163 aaKnown RBP9.41□□□□□ -0.9
RPS28-204ENST00000602140 SNRPGP15A8MWD9 76 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 SOCS3O14543 225 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 ZNF709Q8N972 641 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 RAB2BQ8WUD1 216 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 PPP1R14BQ96C90 147 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 CLUHP3Q96NS8 147 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 SLC35B3Q9H1N7 401 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 RFNGQ9Y644 331 aa9.4□□□□□ -0.9
RPS28-204ENST00000602140 KIAA1109Q2LD37 5005 aa9.39□□□□□ -0.91
RPS28-204ENST00000602140 A0A1B0GVY2 172 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms