RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 GABARAPO95166 117 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 S100A7P31151 101 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 ATP5IP56385 69 aaPredicted RBP6.88□□□□□ -1.31
VRK3-224ENST00000601849 KLF9Q13886 244 aaPredicted RBP6.88□□□□□ -1.31
VRK3-224ENST00000601849 MEF2DQ14814 521 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 RNASE12Q5GAN4 147 aaKnown RBP6.88□□□□□ -1.31
VRK3-224ENST00000601849 STEAP1BQ6NZ63 245 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 OR4B1Q8NGF8 309 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 OR13C8Q8NGS7 320 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 MARCH1Q8TCQ1 289 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 SCGB3A2Q96PL1 93 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 EXTL2Q9UBQ6 330 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 TMED3Q9Y3Q3 217 aa6.88□□□□□ -1.31
VRK3-224ENST00000601849 ZFP92A6NM28 416 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 SNRPGP15A8MWD9 76 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 IGKV3-20P01619 116 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 HBE1P02100 147 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 OR5AC1P0C628 307 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 PSG1P11464 419 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 VBP1P61758 197 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 NCS1P62166 190 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 MRPS10P82664 201 aaKnown RBP6.87□□□□□ -1.31
VRK3-224ENST00000601849 SSBP1Q04837 148 aaKnown RBP6.87□□□□□ -1.31
VRK3-224ENST00000601849 SURF2Q15527 256 aaPredicted RBP6.87□□□□□ -1.31
VRK3-224ENST00000601849 USF2Q15853 346 aaPredicted RBP6.87□□□□□ -1.31
VRK3-224ENST00000601849 AARDQ4LEZ3 155 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 TMEM268Q5VZI3 342 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 OR8G2PQ6IF36 304 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 ZNF705AQ6ZN79 300 aaPredicted RBP6.87□□□□□ -1.31
VRK3-224ENST00000601849 FOXI2Q6ZQN5 318 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 Q6ZRM9 215 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 OR52I2Q8NH67 350 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 PPP1R14BQ96C90 147 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 TMEM208Q9BTX3 173 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 PBDC1Q9BVG4 233 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 FUNDC2Q9BWH2 189 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 NAA60Q9H7X0 242 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 CACNG5Q9UF02 275 aa6.87□□□□□ -1.31
VRK3-224ENST00000601849 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 A0A1B0GVY2 172 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 ZNF705FA8MVS1 300 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 RTL8CO15255 209 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 CFDP00746 253 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 ZNF705DP0CH99 300 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 ZNF705BP0CI00 300 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 SULT1A3P0DMM9 295 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 SULT1A4P0DMN0 295 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 ANXA3P12429 323 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 HTN3P15516 51 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 ZNF182P17025 639 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 GPX4P36969 197 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 PSMB3P49720 205 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 PSG9Q00887 426 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 OXA1LQ15070 435 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 RRN3P1Q2M238 152 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 C1orf194Q5T5A4 169 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 C1orf134Q5TEV5 83 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 GSG1LQ6UXU4 331 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 SELENOHQ8IZQ5 122 aaKnown RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 OR8I2Q8N0Y5 310 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 GLYATL2Q8WU03 294 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 GPR146Q96CH1 333 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 RNF125Q96EQ8 232 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 SLC35E1Q96K37 410 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 MAGT1Q9H0U3 335 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
VRK3-224ENST00000601849 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 DKK2Q9UBU2 259 aa6.86□□□□□ -1.31
VRK3-224ENST00000601849 A0A0G2JRQ6 117 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 RGS5O15539 181 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 CD74P04233 296 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 MEOX2P50222 304 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 CCR6P51684 374 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 FAM3BP58499 235 aaPredicted RBP6.85□□□□□ -1.31
VRK3-224ENST00000601849 DAD1P61803 113 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 RAB11AP62491 216 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 SUPT4H1P63272 117 aaKnown RBP6.85□□□□□ -1.31
VRK3-224ENST00000601849 FAM222AQ5U5X8 452 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 GPR107Q5VW38 600 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 LGI3Q8N145 548 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 C15orf53Q8NAA6 179 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 DTD1Q8TEA8 209 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 IL22RA2Q969J5 263 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 PRRT1Q99946 306 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 NAA50Q9GZZ1 169 aaKnown RBP6.85□□□□□ -1.31
VRK3-224ENST00000601849 RABL2AQ9UBK7 228 aaPredicted RBP6.85□□□□□ -1.31
VRK3-224ENST00000601849 RABL2BQ9UNT1 228 aa6.85□□□□□ -1.31
VRK3-224ENST00000601849 LOC102723971A0A1B0GUV8 181 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 CRYM-AS1A6NIL9 109 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 ISLRO14498 428 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 AKAIN1P0CW23 69 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 AKR1C4P17516 323 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 FXYD7P58549 80 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 B2MP61769 119 aa6.84□□□□□ -1.31
VRK3-224ENST00000601849 RPP30P78346 268 aaKnown RBP6.84□□□□□ -1.31
VRK3-224ENST00000601849 CTF1Q16619 201 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms