RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 RUSC1-AS1Q66K80 236 aa14.83□□□□□ -0.04
UPF1-210ENST00000600689 HIST1H1EP10412 219 aaKnown RBP14.83□□□□□ -0.04
UPF1-210ENST00000600689 SLC25A34Q6PIV7 304 aa14.83□□□□□ -0.04
UPF1-210ENST00000600689 ZCCHC24Q8N2G6 241 aaKnown RBP14.83□□□□□ -0.04
UPF1-210ENST00000600689 MRPL20Q9BYC9 149 aaKnown RBP14.83□□□□□ -0.04
UPF1-210ENST00000600689 CST9LQ9H4G1 147 aa14.83□□□□□ -0.04
UPF1-210ENST00000600689 IGHV3-72A0A0B4J1Y9 119 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 DIAPH2-AS1Q14236 149 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 ITGB1BP1O14713 200 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 CHEK1O14757 476 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 TMEM116Q8NCL8 245 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 PCNX1Q96RV3 2341 aa14.82□□□□□ -0.04
UPF1-210ENST00000600689 FXYD7P58549 80 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 HBBP68871 147 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 BVES-AS1Q5T3Y7 98 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 PDPNQ86YL7 162 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 TEX45Q8NA69 505 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 KLK10O43240 276 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 ERHP84090 104 aaKnown RBP14.81□□□□□ -0.04
UPF1-210ENST00000600689 GUSBP1Q15486 140 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 GTSF1Q8WW33 167 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 DAZAP1Q96EP5 407 aaKnown RBP14.81□□□□□ -0.04
UPF1-210ENST00000600689 K7EP13 123 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 CCL3L1P16619 93 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 PNKDQ8N490 385 aa14.81□□□□□ -0.04
UPF1-210ENST00000600689 TRAV17A0A0B4J275 112 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 PPIAL4DF5H284 164 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 P01737 135 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 IGFL2Q6UWQ7 119 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 ARL6IP6Q8N6S5 226 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 RIPPLY3P57055 190 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 FAM120AOSQ5T036 256 aa14.8□□□□□ -0.04
UPF1-210ENST00000600689 TRAV30A0A087WSZ9 112 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 PSG9Q00887 426 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 CIARTQ8N365 385 aaPredicted RBP14.79□□□□□ -0.04
UPF1-210ENST00000600689 TRAV8-6A0A0B4J262 113 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 A0A1W2PRD5 423 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 A0A1W2PRF3 423 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 A0A1W2PRM7 423 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 FAM87AP0C7U9 286 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 WT1-ASQ06250 92 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 C2orf83Q53S99 150 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 OCIAD2Q56VL3 154 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 LRRC10Q5BKY1 277 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 FXYD5Q96DB9 178 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 TMUB1Q9BVT8 246 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 EPDR1Q9UM22 224 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 ZNF257Q9Y2Q1 563 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 ENSAO43768 121 aaKnown RBP14.79□□□□□ -0.04
UPF1-210ENST00000600689 DKK4Q9UBT3 224 aa14.79□□□□□ -0.04
UPF1-210ENST00000600689 ADGRG4Q8IZF6 3080 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 hADV38S2A0JD32 116 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 DLL1O00548 723 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 TMEM191AQ9H0A3 160 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 TPSG1Q9NRR2 321 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 DLX1P56177 255 aa14.78□□□□□ -0.04
UPF1-210ENST00000600689 KLF5Q13887 457 aaPredicted RBP14.78□□□□□ -0.04
UPF1-210ENST00000600689 RPP21Q9H633 154 aaKnown RBP14.78□□□□□ -0.04
UPF1-210ENST00000600689 SAP30O75446 220 aa14.77□□□□□ -0.04
UPF1-210ENST00000600689 RPRMLQ8N4K4 120 aa14.77□□□□□ -0.04
UPF1-210ENST00000600689 WIPF2Q8TF74 440 aaPredicted RBP14.77□□□□□ -0.04
UPF1-210ENST00000600689 ZNF430Q9H8G1 570 aaPredicted RBP14.77□□□□□ -0.04
UPF1-210ENST00000600689 LOC389332A0A1B0GUA5 103 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 HTR1DP28221 377 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 CCL8P80075 99 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 H1FXQ92522 213 aaKnown RBP14.77□□□□□ -0.05
UPF1-210ENST00000600689 MRPL32Q9BYC8 188 aaKnown RBP14.77□□□□□ -0.05
UPF1-210ENST00000600689 SSUH2Q9Y2M2 353 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 KALRNO60229 2985 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 PSMB11A5LHX3 300 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 BPIFB3P59826 476 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 PRNTQ86SH4 94 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 SARAFQ96BY9 339 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 MAP1LC3CQ9BXW4 147 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 HILPDAQ9Y5L2 63 aa14.77□□□□□ -0.05
UPF1-210ENST00000600689 ANKRD11Q6UB99 2663 aaPredicted RBP14.76□□□□□ -0.05
UPF1-210ENST00000600689 SLC25A17O43808 307 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 CGB3P0DN86 165 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 CGB7P0DN87 165 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 COL8A1P27658 744 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 OR1L8Q8NGR8 309 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 PIEZO2Q9H5I5 2752 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 NBEAP1P0C6P0 100 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 ARF6P62330 175 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 SEM1Q6ZVN7 128 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 RAB37Q96AX2 223 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 ADTRPQ96IZ2 230 aa14.76□□□□□ -0.05
UPF1-210ENST00000600689 PRR33A8MZF0 331 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 OR2J3O76001 311 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 OR8A1Q8NGG7 326 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 GPR82Q96P67 336 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 GAGE12BA1L429 117 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 TM4SF5O14894 197 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 FAM231DQ6ZW35 169 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 BHLHA15Q7RTS1 189 aaPredicted RBP14.75□□□□□ -0.05
UPF1-210ENST00000600689 EXOC3-AS1Q8N2X6 119 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 ST20Q9HBF5 79 aa14.75□□□□□ -0.05
UPF1-210ENST00000600689 A8MWL6 223 aa14.74□□□□□ -0.05
UPF1-210ENST00000600689 K7EM74 188 aa14.74□□□□□ -0.05
UPF1-210ENST00000600689 OR1L4Q8NGR5 311 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms