RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
LSM4-206ENST00000600289 RBMY1BA6NDE4 496 aaKnown RBP12.04□□□□□ -0.48
LSM4-206ENST00000600289 RBMY1EA6NEQ0 496 aaKnown RBP12.04□□□□□ -0.48
LSM4-206ENST00000600289 PMS2P5A8MQ11 134 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 SSSCA1O60232 199 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 TSC22D2O75157 780 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 IL4P05112 153 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 HNRNPCP07910 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
LSM4-206ENST00000600289 RBMY1DP0C7P1 496 aaKnown RBP12.04□□□□□ -0.48
LSM4-206ENST00000600289 PSG1P11464 419 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 CMC4P56277 68 aaPredicted RBP12.04□□□□□ -0.48
LSM4-206ENST00000600289 USF2Q15853 346 aaPredicted RBP12.04□□□□□ -0.48
LSM4-206ENST00000600289 TMEM14EPQ6UXP3 125 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 NRARPQ7Z6K4 114 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 OR51G1Q8NGK1 321 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 GRAMD2BQ96HH9 432 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 TRGV9Q99603 122 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 PSENENQ9NZ42 101 aa12.04□□□□□ -0.48
LSM4-206ENST00000600289 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 ZFP92A6NM28 416 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 H3BP45 60 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 CCSO14618 274 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 PRAF2O60831 178 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 MBPP02686 304 aaPredicted RBP12.03□□□□□ -0.48
LSM4-206ENST00000600289 DEFA1P59665 94 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 DEFA3P59666 94 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 PAFAH1B2P68402 229 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 OR8G2PQ6IF36 304 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 LILRB2Q8N423 598 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 RCHY1Q96PM5 261 aa12.03□□□□□ -0.48
LSM4-206ENST00000600289 PAIP2BQ9ULR5 123 aaKnown RBP12.03□□□□□ -0.48
LSM4-206ENST00000600289 IGKV1OR2-108A0A075B7D4 117 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 SNRPGP15A8MWD9 76 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 FNDC10F2Z333 226 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 DFFBO76075 338 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 SCGB1D2O95969 90 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 CFDP00746 253 aaPredicted RBP12.02□□□□□ -0.49
LSM4-206ENST00000600289 NUP62P37198 522 aaPredicted RBP12.02□□□□□ -0.49
LSM4-206ENST00000600289 P2RY1P47900 373 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 C16orf54Q6UWD8 224 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 MUC7Q8TAX7 377 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 RNF125Q96EQ8 232 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 C2orf50Q96LR7 162 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 CITED4Q96RK1 184 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 MARVELD1Q9BSK0 173 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 GPN1Q9HCN4 374 aaPredicted RBP12.02□□□□□ -0.49
LSM4-206ENST00000600289 GSKIPQ9P0R6 139 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 RABAC1Q9UI14 185 aa12.02□□□□□ -0.49
LSM4-206ENST00000600289 IGHV3-66A0A0C4DH42 116 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 HELTA6NFD8 242 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 ZNF90Q03938 601 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 IL15RAQ13261 267 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 ACOT7LQ6ZUV0 252 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 GLMPQ8WWB7 406 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 MS4A6AQ9H2W1 248 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 FRAS1Q86XX4 4008 aa12.01□□□□□ -0.49
LSM4-206ENST00000600289 LOC102724200A0A096LPH7 203 aaPredicted RBP12□□□□□ -0.49
LSM4-206ENST00000600289 C7orf66A4D0T2 115 aa12□□□□□ -0.49
LSM4-206ENST00000600289 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
LSM4-206ENST00000600289 BUB3O43684 328 aa12□□□□□ -0.49
LSM4-206ENST00000600289 EIF2B2P49770 351 aaKnown RBP12□□□□□ -0.49
LSM4-206ENST00000600289 DLK1P80370 383 aa12□□□□□ -0.49
LSM4-206ENST00000600289 GSG1LQ6UXU4 331 aa12□□□□□ -0.49
LSM4-206ENST00000600289 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
LSM4-206ENST00000600289 C11orf1Q9H5F2 150 aa12□□□□□ -0.49
LSM4-206ENST00000600289 MAP6D1Q9H9H5 199 aa12□□□□□ -0.49
LSM4-206ENST00000600289 UBQLN2Q9UHD9 624 aa12□□□□□ -0.49
LSM4-206ENST00000600289 PFDN2Q9UHV9 154 aa12□□□□□ -0.49
LSM4-206ENST00000600289 SLC45A2Q9UMX9 530 aa12□□□□□ -0.49
LSM4-206ENST00000600289 C5orf51A6NDU8 294 aa11.99□□□□□ -0.49
LSM4-206ENST00000600289 FAM25EA8MYX2 175 aa11.99□□□□□ -0.49
LSM4-206ENST00000600289 K7EPK0 472 aa11.99□□□□□ -0.49
LSM4-206ENST00000600289 AP2S1P53680 142 aaPredicted RBP11.99□□□□□ -0.49
LSM4-206ENST00000600289 GGACTQ9BVM4 153 aa11.99□□□□□ -0.49
LSM4-206ENST00000600289 IGKV3-7A0A075B6H7 116 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 K7EQG2 157 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 METTL15P1P0C7V9 234 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 TFPI2P48307 235 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 AKR1C1Q04828 323 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 GBGT1Q8N5D6 347 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 OR10P1Q8NGE3 313 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 DCANP1Q8TF63 244 aa11.98□□□□□ -0.49
LSM4-206ENST00000600289 KIR2DL5BA0A0G2JN68 375 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 KIR2DL5BA0A0G2JPC4 375 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 L7N2F9 121 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 DNASE2O00115 360 aaPredicted RBP11.97□□□□□ -0.49
LSM4-206ENST00000600289 CCNKO75909 580 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 RPL11P62913 178 aaKnown RBP11.97□□□□□ -0.49
LSM4-206ENST00000600289 VAMP2P63027 116 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 C1orf194Q5T5A4 169 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 KIR2DL5AQ8N109 375 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 BPIFCQ8NFQ6 507 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 KIR2DL5BQ8NHK3 375 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 NPVFQ9HCQ7 196 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 SEPSECSQ9HD40 501 aaKnown RBP11.97□□□□□ -0.49
LSM4-206ENST00000600289 FBXL17Q9UF56 701 aa11.97□□□□□ -0.49
LSM4-206ENST00000600289 LSM5Q9Y4Y9 91 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms