RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 OR51G1Q8NGK1 321 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 RHPN1-AS1Q9BWJ2 59 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 VSIRQ9H7M9 311 aa15.33■□□□□ 0.04
PNKP-211ENST00000598020 CST7O76096 145 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 CFDP00746 253 aaPredicted RBP15.32■□□□□ 0.04
PNKP-211ENST00000598020 NPPCP23582 126 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 S100A11P31949 105 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 BMI1P35226 326 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 PRR25Q96S07 402 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 METTL26Q96S19 204 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 SLC25A31Q9H0C2 315 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 U3KQE9 123 aa15.32■□□□□ 0.04
PNKP-211ENST00000598020 ZNF785A8K8V0 405 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 K7EIL1 84 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 IL4P05112 153 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 SLC38A11Q08AI6 406 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 VWC2Q2TAL6 325 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 TMEM61Q8N0U2 210 aa15.31■□□□□ 0.04
PNKP-211ENST00000598020 LSM4Q9Y4Z0 139 aaKnown RBP15.31■□□□□ 0.04
PNKP-211ENST00000598020 A0A1W2PS18 150 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 SMCO3A2RU48 225 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 CD5P06127 495 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 GIPP09681 153 aaPredicted RBP15.3■□□□□ 0.04
PNKP-211ENST00000598020 LYL1P12980 280 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 HBG1P69891 147 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 HBG2P69892 147 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 USF2Q15853 346 aaPredicted RBP15.3■□□□□ 0.04
PNKP-211ENST00000598020 LAMTOR1Q6IAA8 161 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 TEPPQ6URK8 271 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 RNF125Q96EQ8 232 aa15.3■□□□□ 0.04
PNKP-211ENST00000598020 TSPAN4O14817 238 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 APOHP02749 345 aaPredicted RBP15.29■□□□□ 0.04
PNKP-211ENST00000598020 BAXQ07812 192 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 ATP6V1FQ16864 119 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 RBPMS2Q6ZRY4 209 aaKnown RBP15.29■□□□□ 0.04
PNKP-211ENST00000598020 TMEM217Q8N7C4 229 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 ST8SIA2Q92186 375 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 RNF2Q99496 336 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 TMEM231Q9H6L2 316 aa15.29■□□□□ 0.04
PNKP-211ENST00000598020 IGHV3-49A0A0A0MS15 119 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 HNRNPCP07910 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
PNKP-211ENST00000598020 SELENOTP62341 195 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 EWSR1Q01844 656 aaKnown RBP eCLIP15.28■□□□□ 0.04
PNKP-211ENST00000598020 FAM90A2PQ658T7 463 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 CYP2G1PQ6ZSU1 146 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 NARS2Q96I59 477 aaKnown RBP15.28■□□□□ 0.04
PNKP-211ENST00000598020 UQCC1Q9NVA1 299 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 MBD2Q9UBB5 411 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 RABAC1Q9UI14 185 aa15.28■□□□□ 0.04
PNKP-211ENST00000598020 RAP2BP61225 183 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 NHLH2Q02577 135 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 OR2F1Q13607 317 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 BPIFCQ8NFQ6 507 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 MRAPQ8TCY5 172 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 SPAG8Q99932 426 aaPredicted RBP15.27■□□□□ 0.04
PNKP-211ENST00000598020 TMEM147Q9BVK8 224 aa15.27■□□□□ 0.04
PNKP-211ENST00000598020 IGHV3OR16-13A0A075B7E8 117 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 IGHV3-74A0A0B4J1X5 117 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 NUP62P37198 522 aaPredicted RBP15.26■□□□□ 0.03
PNKP-211ENST00000598020 EIF2B2P49770 351 aaKnown RBP15.26■□□□□ 0.03
PNKP-211ENST00000598020 FGL1Q08830 312 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 GUCA2BQ16661 112 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 TMEM182Q6ZP80 229 aaPredicted RBP15.26■□□□□ 0.03
PNKP-211ENST00000598020 Q8N1Y9 231 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 LILRB2Q8N423 598 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 THAP6Q8TBB0 222 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 GRAMD2BQ96HH9 432 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 PFDN2Q9UHV9 154 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 SLC45A2Q9UMX9 530 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 WDR83OSQ9Y284 106 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 SELENOKQ9Y6D0 94 aa15.26■□□□□ 0.03
PNKP-211ENST00000598020 BUB3O43684 328 aa15.25■□□□□ 0.03
PNKP-211ENST00000598020 PLP1P60201 277 aa15.25■□□□□ 0.03
PNKP-211ENST00000598020 LYZP61626 148 aa15.25■□□□□ 0.03
PNKP-211ENST00000598020 OR5C1Q8NGR4 320 aa15.25■□□□□ 0.03
PNKP-211ENST00000598020 CHAC2Q8WUX2 184 aa15.25■□□□□ 0.03
PNKP-211ENST00000598020 AGPAT2O15120 278 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 GATA2P23769 480 aaPredicted RBP15.24■□□□□ 0.03
PNKP-211ENST00000598020 RPL12P30050 165 aaKnown RBP15.24■□□□□ 0.03
PNKP-211ENST00000598020 C16orf54Q6UWD8 224 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 TCF24Q7RTU0 167 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 ZNF546Q86UE3 836 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 GTSCR1Q86UQ5 136 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 MGST2Q99735 147 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 PBDC1Q9BVG4 233 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 HSPB11Q9Y547 144 aa15.24■□□□□ 0.03
PNKP-211ENST00000598020 IGHV3-66A0A0C4DH42 116 aa15.23■□□□□ 0.03
PNKP-211ENST00000598020 DFFBO76075 338 aa15.23■□□□□ 0.03
PNKP-211ENST00000598020 RAB31Q13636 194 aa15.23■□□□□ 0.03
PNKP-211ENST00000598020 GLMPQ8WWB7 406 aa15.23■□□□□ 0.03
PNKP-211ENST00000598020 TRAV2A0A0B4J234 112 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 MPDU1O75352 247 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 C1orf194Q5T5A4 169 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 PXDC1Q5TGL8 231 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 Q6ZNX1 250 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 STPG3Q8N7X2 389 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 NEURL2Q9BR09 285 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 SMAD5-AS1Q9Y6J3 95 aa15.22■□□□□ 0.03
PNKP-211ENST00000598020 HELTA6NFD8 242 aa15.21■□□□□ 0.03
PNKP-211ENST00000598020 OR4C46A6NHA9 309 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms