RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 MARC2Q969Z3 335 aa16.8■□□□□ 0.28
CHMP2A-204ENST00000597848 SMIM3Q9BZL3 60 aa16.8■□□□□ 0.28
CHMP2A-204ENST00000597848 MRPL27Q9P0M9 148 aaKnown RBP16.8■□□□□ 0.28
CHMP2A-204ENST00000597848 IGHV3-49A0A0A0MS15 119 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 NPPCP23582 126 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 RAB31Q13636 194 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 VWC2Q2TAL6 325 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 SAMD5Q5TGI4 173 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 ADAMTSL5Q6ZMM2 481 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 CYP2G1PQ6ZSU1 146 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 BPIFCQ8NFQ6 507 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 METTL26Q96S19 204 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 PBDC1Q9BVG4 233 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 SIGLEC8Q9NYZ4 499 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 PKD1L1Q8TDX9 2849 aa16.79■□□□□ 0.28
CHMP2A-204ENST00000597848 G3V3Q6 166 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 GATA2P23769 480 aaPredicted RBP16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 LYZP61626 148 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 BTNL8Q6UX41 500 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 RNF125Q96EQ8 232 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 WDR83OSQ9Y284 106 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 LSM4Q9Y4Z0 139 aaKnown RBP16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 SELENOKQ9Y6D0 94 aa16.78■□□□□ 0.28
CHMP2A-204ENST00000597848 MGAM2Q2M2H8 2515 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 IGHV3OR16-13A0A075B7E8 117 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 IGHV3-74A0A0B4J1X5 117 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 IGHV7-4-1A0A0J9YVY3 117 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 AGPAT2O15120 278 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 C8orf88P0DMB2 117 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 FGF7P21781 194 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 TMEM182Q6ZP80 229 aaPredicted RBP16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 AQP10Q96PS8 301 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 ATP5SQ99766 215 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 SMPXQ9UHP9 88 aa16.77■□□□□ 0.28
CHMP2A-204ENST00000597848 WI2-2373I1.2A0A1W2PRP0 233 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 DFFBO76075 338 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 CFDP00746 253 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 CAMLGP49069 296 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 AP2S1P53680 142 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 SELENOTP62341 195 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 USF2Q15853 346 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 NARS2Q96I59 477 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 ST6GAL2Q96JF0 529 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 MGST2Q99735 147 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 RHPN1-AS1Q9BWJ2 59 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 TECRQ9NZ01 308 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 RABAC1Q9UI14 185 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 TNFSF18Q9UNG2 199 aa16.76■□□□□ 0.27
CHMP2A-204ENST00000597848 WIPF1O43516 503 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 IGLV1-51P01701 117 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 BMI1P35226 326 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 DEFB114Q30KQ6 69 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 AKAP14Q86UN6 197 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 MLXQ9UH92 298 aa16.75■□□□□ 0.27
CHMP2A-204ENST00000597848 IGHV3-66A0A0C4DH42 116 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 CHEK1O14757 476 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 ARPC5O15511 151 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 IFNA5P01569 189 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 APOHP02749 345 aaPredicted RBP16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 HNRNPCP07910 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 ORM2P19652 201 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 CRYBB3P26998 211 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 SLC45A2Q9UMX9 530 aa16.74■□□□□ 0.27
CHMP2A-204ENST00000597848 A0A1W2PS18 150 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 MPDU1O75352 247 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 LINC00869P0C866 280 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 CD300EQ496F6 205 aaPredicted RBP16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 OR1B1Q8NGR6 318 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 SCGB1C1Q8TD33 95 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 PPP1R14BQ96C90 147 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 WFDC1Q9HC57 220 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 ZMAT5Q9UDW3 170 aaKnown RBP16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 FBXL17Q9UF56 701 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 PFDN2Q9UHV9 154 aa16.73■□□□□ 0.27
CHMP2A-204ENST00000597848 RNF222A6NCQ9 220 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 EIF2B2P49770 351 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 TCTE3Q8IZS6 198 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 ST8SIA2Q92186 375 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 GGTLC1Q9BX51 225 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 WDR61Q9GZS3 305 aaKnown RBP16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 MFFQ9GZY8 342 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 TMEM231Q9H6L2 316 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 DOK5Q9P104 306 aa16.72■□□□□ 0.27
CHMP2A-204ENST00000597848 HYPMO75409 117 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 OR5G3P0C626 314 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 BEAN1Q3B7T3 259 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 MIC13Q5XKP0 118 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 LCN12Q6JVE5 192 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 RBPMS2Q6ZRY4 209 aaKnown RBP16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 ZNF709Q8N972 641 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 OR11H4Q8NGC9 324 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 OR2K2Q8NGT1 345 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 GRAMD2BQ96HH9 432 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 NPCDR1Q9BY65 106 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 ARL6Q9H0F7 186 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 VSIRQ9H7M9 311 aa16.71■□□□□ 0.27
CHMP2A-204ENST00000597848 KRTAP10-11P60412 298 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 EGFEM1PQ0D2K5 195 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 OPCMLQ14982 345 aa16.7■□□□□ 0.26
CHMP2A-204ENST00000597848 LAMTOR1Q6IAA8 161 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms