RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 TMEM144Q7Z5S9 345 aa14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 ST8SIA2Q92186 375 aa14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 MED28Q9H204 178 aa14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 LYRM2Q9NU23 88 aaPredicted RBP14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 LSM4Q9Y4Z0 139 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 SMAD5-AS1Q9Y6J3 95 aa14.8□□□□□ -0.04
SHKBP1-214ENST00000597396 IGKV1OR2-108A0A075B7D4 117 aa14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 IGHV3-66A0A0C4DH42 116 aa14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 HNRNPCP07910 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 OR2F1Q13607 317 aa14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 RNF2Q99496 336 aa14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 PBDC1Q9BVG4 233 aa14.79□□□□□ -0.04
SHKBP1-214ENST00000597396 E5RGE8 158 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 FNDC10F2Z333 226 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 CST7O76096 145 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 APOHP02749 345 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 CRYBB3P26998 211 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 CD81P60033 236 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 SLC38A11Q08AI6 406 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 ARL16Q0P5N6 197 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 OXA1LQ15070 435 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 USF2Q15853 346 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 STX12Q86Y82 276 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 PPP1R1CQ8WVI7 109 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 RNF125Q96EQ8 232 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 VSIRQ9H7M9 311 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 NPVFQ9HCQ7 196 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 RABAC1Q9UI14 185 aa14.78□□□□□ -0.04
SHKBP1-214ENST00000597396 TSPAN4O14817 238 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 LYZP61626 148 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 TCF24Q7RTU0 167 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 Q8N1Y9 231 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 TMEM252Q8N6L7 170 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 TMEM217Q8N7C4 229 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 GRAMD2BQ96HH9 432 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 SPAG8Q99932 426 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 NEURL2Q9BR09 285 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 GGACTQ9BVM4 153 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 OR5AC2Q9NZP5 309 aa14.77□□□□□ -0.05
SHKBP1-214ENST00000597396 IGSF23A1L1A6 192 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 CFDP00746 253 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 CD5P06127 495 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 PET100P0DJ07 73 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 SULT1A1P50225 295 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 FCN2Q15485 313 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 LILRB2Q8N423 598 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 BPIFCQ8NFQ6 507 aa14.76□□□□□ -0.05
SHKBP1-214ENST00000597396 IGKV3-7A0A075B6H7 116 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 MPC2O95563 127 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 CD7P09564 240 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 CXCL3P19876 107 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 P2RY1P47900 373 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 HBG1P69891 147 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 HBG2P69892 147 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 TEPPQ6URK8 271 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 CYP2G1PQ6ZSU1 146 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 SLC25A31Q9H0C2 315 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 PFDN2Q9UHV9 154 aa14.75□□□□□ -0.05
SHKBP1-214ENST00000597396 OR4C46A6NHA9 309 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 H0YIZ8 118 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 DFFBO76075 338 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 NUP62P37198 522 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 EIF2B2P49770 351 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 RPL11P62913 178 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 FAM90A2PQ658T7 463 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 OR11H7Q8NGC8 314 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 U3KQE9 123 aa14.74□□□□□ -0.05
SHKBP1-214ENST00000597396 GATA2P23769 480 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 S100A11P31949 105 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 TFPI2P48307 235 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 PAFAH1B2P68402 229 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 PPP1R14BQ96C90 147 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 TMEM147Q9BVK8 224 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 TUBA4BQ9H853 241 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 UQCC1Q9NVA1 299 aa14.73□□□□□ -0.05
SHKBP1-214ENST00000597396 DNASE2O00115 360 aaPredicted RBP14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 IGHV4-30-4P0DP06 118 aa14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 SELENOTP62341 195 aa14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 EWSR1Q01844 656 aaKnown RBP eCLIP14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 C16orf54Q6UWD8 224 aa14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 GBGT1Q8N5D6 347 aa14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 B9D2Q9BPU9 175 aa14.72□□□□□ -0.05
SHKBP1-214ENST00000597396 OR11H12B2RN74 326 aa14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 ATP6V1FQ16864 119 aa14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 TMEM182Q6ZP80 229 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 WFDC3Q8IUB2 231 aa14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 RNF126Q9BV68 326 aa14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 MBD2Q9UBB5 411 aa14.71□□□□□ -0.05
SHKBP1-214ENST00000597396 UBE2L5PA0A1B0GUS4 154 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 HELTA6NFD8 242 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 AGPAT2O15120 278 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 BUB3O43684 328 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 FRMD6-AS1P0C7T7 363 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 LINC00869P0C866 280 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 ORM2P19652 201 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 NHLH2Q02577 135 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 BAXQ07812 192 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 RAB31Q13636 194 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 ZNF546Q86UE3 836 aa14.7□□□□□ -0.06
SHKBP1-214ENST00000597396 STXBP6Q8NFX7 210 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms