RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 FCN2Q15485 313 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 LAMTOR1Q6IAA8 161 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 RBPMS2Q6ZRY4 209 aaKnown RBP10.82□□□□□ -0.68
LIG1-208ENST00000595758 TMEM144Q7Z5S9 345 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 OR51G1Q8NGK1 321 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 PPP1R1CQ8WVI7 109 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 GGACTQ9BVM4 153 aa10.82□□□□□ -0.68
LIG1-208ENST00000595758 H0YIZ8 118 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 APOHP02749 345 aaPredicted RBP10.81□□□□□ -0.68
LIG1-208ENST00000595758 CRYBB3P26998 211 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 SULT1A1P50225 295 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 SLC38A11Q08AI6 406 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 OR2F1Q13607 317 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 STX12Q86Y82 276 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 TMEM252Q8N6L7 170 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 TMEM217Q8N7C4 229 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 ST8SIA2Q92186 375 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 NARS2Q96I59 477 aaKnown RBP10.81□□□□□ -0.68
LIG1-208ENST00000595758 RNF2Q99496 336 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 NPVFQ9HCQ7 196 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 OR5AC2Q9NZP5 309 aa10.81□□□□□ -0.68
LIG1-208ENST00000595758 IGHV3-66A0A0C4DH42 116 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 A0A1W2PS18 150 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 IGSF23A1L1A6 192 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 MPC2O95563 127 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 PET100P0DJ07 73 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 P2RY1P47900 373 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 USF2Q15853 346 aaPredicted RBP10.8□□□□□ -0.68
LIG1-208ENST00000595758 GTSCR1Q86UQ5 136 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 OR11H7Q8NGC8 314 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 RNF125Q96EQ8 232 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 RNF126Q9BV68 326 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 TMEM231Q9H6L2 316 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 VSIRQ9H7M9 311 aa10.8□□□□□ -0.68
LIG1-208ENST00000595758 LSM4Q9Y4Z0 139 aaKnown RBP10.8□□□□□ -0.68
LIG1-208ENST00000595758 TSPAN4O14817 238 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 CFDP00746 253 aaPredicted RBP10.79□□□□□ -0.68
LIG1-208ENST00000595758 HNRNPCP07910 306 aaKnown RBP eCLIP10.79□□□□□ -0.68
LIG1-208ENST00000595758 S100A11P31949 105 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 HBG1P69891 147 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 HBG2P69892 147 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 Q8N1Y9 231 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 LILRB2Q8N423 598 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 SLC25A31Q9H0C2 315 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 RABAC1Q9UI14 185 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 U3KQE9 123 aa10.79□□□□□ -0.68
LIG1-208ENST00000595758 DFFBO76075 338 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 CD5P06127 495 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 LYZP61626 148 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 TEPPQ6URK8 271 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 CYP2G1PQ6ZSU1 146 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 TCF24Q7RTU0 167 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 BPIFCQ8NFQ6 507 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 GRAMD2BQ96HH9 432 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 SPAG8Q99932 426 aaPredicted RBP10.78□□□□□ -0.68
LIG1-208ENST00000595758 PFDN2Q9UHV9 154 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 SMAD5-AS1Q9Y6J3 95 aa10.78□□□□□ -0.68
LIG1-208ENST00000595758 GATA2P23769 480 aaPredicted RBP10.77□□□□□ -0.69
LIG1-208ENST00000595758 EIF2B2P49770 351 aaKnown RBP10.77□□□□□ -0.69
LIG1-208ENST00000595758 CD81P60033 236 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 SELENOTP62341 195 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 RPL11P62913 178 aaKnown RBP10.77□□□□□ -0.69
LIG1-208ENST00000595758 EWSR1Q01844 656 aaKnown RBP eCLIP10.77□□□□□ -0.69
LIG1-208ENST00000595758 ATP6V1FQ16864 119 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 FAM90A2PQ658T7 463 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 TMEM182Q6ZP80 229 aaPredicted RBP10.77□□□□□ -0.69
LIG1-208ENST00000595758 NEURL2Q9BR09 285 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 TMEM147Q9BVK8 224 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 UQCC1Q9NVA1 299 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 MBD2Q9UBB5 411 aa10.77□□□□□ -0.69
LIG1-208ENST00000595758 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 OR4C46A6NHA9 309 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 CD7P09564 240 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 GIPP09681 153 aaPredicted RBP10.76□□□□□ -0.69
LIG1-208ENST00000595758 NUP62P37198 522 aaPredicted RBP10.76□□□□□ -0.69
LIG1-208ENST00000595758 PAFAH1B2P68402 229 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 NHLH2Q02577 135 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 BAXQ07812 192 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 RAB31Q13636 194 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 VWC2Q2TAL6 325 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 THAP6Q8TBB0 222 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 ASB13Q8WXK3 278 aa10.76□□□□□ -0.69
LIG1-208ENST00000595758 BUB3O43684 328 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 ORM2P19652 201 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 C16orf54Q6UWD8 224 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 OR5C1Q8NGR4 320 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 PPP1R14BQ96C90 147 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 WDR83OSQ9Y284 106 aa10.75□□□□□ -0.69
LIG1-208ENST00000595758 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
LIG1-208ENST00000595758 UBE2L5PA0A1B0GUS4 154 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 HELTA6NFD8 242 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 AGPAT2O15120 278 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 LINC00869P0C866 280 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 LYL1P12980 280 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 RPL12P30050 165 aaKnown RBP10.74□□□□□ -0.69
LIG1-208ENST00000595758 TFPI2P48307 235 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 CAMLGP49069 296 aa10.74□□□□□ -0.69
LIG1-208ENST00000595758 RAP2BP61225 183 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms