RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 TCF24Q7RTU0 167 aa10.32□□□□□ -0.76
SHKBP1-207ENST00000595631 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
SHKBP1-207ENST00000595631 METTL26Q96S19 204 aa10.32□□□□□ -0.76
SHKBP1-207ENST00000595631 VSIRQ9H7M9 311 aa10.32□□□□□ -0.76
SHKBP1-207ENST00000595631 TSPAN4O14817 238 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 DFFBO76075 338 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 CRYBB3P26998 211 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 TFPI2P48307 235 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 LRRC37A5PQ49AS3 106 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 LAMTOR1Q6IAA8 161 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 TMEM182Q6ZP80 229 aaPredicted RBP10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 GBGT1Q8N5D6 347 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 DEFB125Q8N687 156 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 RNF125Q96EQ8 232 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 TRGV9Q99603 122 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 MGAT4CQ9UBM8 478 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 UBQLN2Q9UHD9 624 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 TGP01266 2768 aa10.31□□□□□ -0.76
SHKBP1-207ENST00000595631 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 CST7O76096 145 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 HNRNPCP07910 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 P2RY1P47900 373 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 CAV2P51636 162 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 LYZP61626 148 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 DLK1P80370 383 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 OR10P1Q8NGE3 313 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 SPAG8Q99932 426 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 NMES1Q9C002 83 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 C19orf73Q9NVV2 129 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 U3KQE9 123 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 DNAH9Q9NYC9 4486 aa10.3□□□□□ -0.76
SHKBP1-207ENST00000595631 OR11H12B2RN74 326 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 H0YIZ8 118 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 PVALBP20472 110 aaPredicted RBP10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 TMEM144Q7Z5S9 345 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 TMEM217Q8N7C4 229 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 STPG3Q8N7X2 389 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 OR5AC2Q9NZP5 309 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 RABAC1Q9UI14 185 aa10.29□□□□□ -0.76
SHKBP1-207ENST00000595631 DEDDO75618 318 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 CXCL3P19876 107 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 SLC38A11Q08AI6 406 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 ODF3L2Q3SX64 289 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 TMEM231Q9H6L2 316 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 SRD5A3Q9H8P0 318 aa10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 LYRM2Q9NU23 88 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-207ENST00000595631 A0A1W2PS18 150 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 RBMY1BA6NDE4 496 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 RBMY1EA6NEQ0 496 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 OR4C46A6NHA9 309 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 A8MZ25 164 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 FABP1P07148 127 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 RBMY1DP0C7P1 496 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 BMI1P35226 326 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 ZNF124Q15973 351 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 RGS21Q2M5E4 152 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 C16orf54Q6UWD8 224 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 CYP2G1PQ6ZSU1 146 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 FAM24BQ8N5W8 94 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 TMEM252Q8N6L7 170 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 PPP1R1CQ8WVI7 109 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 NARS2Q96I59 477 aaKnown RBP10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 CITED4Q96RK1 184 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 MS4A6AQ9H2W1 248 aa10.27□□□□□ -0.77
SHKBP1-207ENST00000595631 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 FCN2Q15485 313 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 STXBP6Q8NFX7 210 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 OR11H7Q8NGC8 314 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 GRAMD2BQ96HH9 432 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 NPVFQ9HCQ7 196 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 DOK5Q9P104 306 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 COL7A1Q02388 2944 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 AGRNO00468 2067 aa10.26□□□□□ -0.77
SHKBP1-207ENST00000595631 FNDC10F2Z333 226 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 BUB3O43684 328 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 SULT1A1P50225 295 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 CYCSP99999 105 aaKnown RBP10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 NHLH2Q02577 135 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 APRG1Q8IVJ8 170 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 BPIFCQ8NFQ6 507 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 MGST2Q99735 147 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 MAP6D1Q9H9H5 199 aa10.25□□□□□ -0.77
SHKBP1-207ENST00000595631 UBE2L5PA0A1B0GUS4 154 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 E5RGE8 158 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 DNASE2O00115 360 aaPredicted RBP10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 MPC2O95563 127 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 LINC00869P0C866 280 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 ORM2P19652 201 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 EWSR1Q01844 656 aaKnown RBP eCLIP10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 OXA1LQ15070 435 aa10.24□□□□□ -0.77
SHKBP1-207ENST00000595631 HAGHQ16775 308 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms