RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 FAM231CP0DMU5 169 aa13.41□□□□□ -0.26
PDE4C-208ENST00000595343 RNASE2P10153 161 aaKnown RBP13.41□□□□□ -0.26
PDE4C-208ENST00000595343 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
PDE4C-208ENST00000595343 ARRDC1Q8N5I2 433 aa13.41□□□□□ -0.26
PDE4C-208ENST00000595343 OR51S1Q8NGJ8 323 aa13.41□□□□□ -0.26
PDE4C-208ENST00000595343 TMEM230Q96A57 120 aa13.41□□□□□ -0.26
PDE4C-208ENST00000595343 MED28Q9H204 178 aa13.41□□□□□ -0.26
PDE4C-208ENST00000595343 FNDC4Q9H6D8 234 aaPredicted RBP13.41□□□□□ -0.26
PDE4C-208ENST00000595343 IFNA17P01571 189 aa13.4□□□□□ -0.26
PDE4C-208ENST00000595343 EIF2B2P49770 351 aaKnown RBP13.4□□□□□ -0.26
PDE4C-208ENST00000595343 MLANAQ16655 118 aa13.4□□□□□ -0.26
PDE4C-208ENST00000595343 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
PDE4C-208ENST00000595343 NARS2Q96I59 477 aaKnown RBP13.4□□□□□ -0.26
PDE4C-208ENST00000595343 RAB40CQ96S21 281 aa13.4□□□□□ -0.26
PDE4C-208ENST00000595343 M0R2N4 97 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 P0C879 139 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 OPRK1P41145 380 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 CD300CQ08708 224 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 DHRS2Q13268 280 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 FAAP20Q6NZ36 180 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 OR4D10Q8NGI6 311 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 NDUFAF3Q9BU61 184 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 SCRT1Q9BWW7 348 aa13.39□□□□□ -0.27
PDE4C-208ENST00000595343 DNAH11Q96DT5 4516 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 SCGB2A1O75556 95 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 IGKV1-17P01599 117 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 AKR1C2P52895 323 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 PSMG4Q5JS54 123 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 U3KQE9 123 aa13.38□□□□□ -0.27
PDE4C-208ENST00000595343 DYNC1H1Q14204 4646 aaKnown RBP13.37□□□□□ -0.27
PDE4C-208ENST00000595343 M0QYG6 137 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 SULT1A3P0DMM9 295 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 SULT1A4P0DMN0 295 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 HOXA1P49639 335 aaPredicted RBP13.37□□□□□ -0.27
PDE4C-208ENST00000595343 RND3P61587 244 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 TIGITQ495A1 244 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 SCGB3A2Q96PL1 93 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 TP53RKQ96S44 253 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 PDCD10Q9BUL8 212 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 FLVCR2Q9UPI3 526 aa13.37□□□□□ -0.27
PDE4C-208ENST00000595343 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 HELTA6NFD8 242 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 PGAM2P15259 253 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 PI3P19957 117 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 NPY1RP25929 384 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 UBE2MP61081 183 aaKnown RBP13.36□□□□□ -0.27
PDE4C-208ENST00000595343 LGALS9BQ3B8N2 356 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 ZFP69Q49AA0 526 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 OR13C8Q8NGS7 320 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 C1QTNF4Q9BXJ3 329 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 ENY2Q9NPA8 101 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 XCL2Q9UBD3 114 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 ABCA13Q86UQ4 5058 aa13.36□□□□□ -0.27
PDE4C-208ENST00000595343 PKD1P98161 4303 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 ATG12O94817 140 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 C1QBP02746 253 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 ANXA3P12429 323 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
PDE4C-208ENST00000595343 FCN2Q15485 313 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 BSXQ3C1V8 233 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 C16orf54Q6UWD8 224 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 ASB13Q8WXK3 278 aa13.35□□□□□ -0.27
PDE4C-208ENST00000595343 ZNF486Q96H40 463 aaPredicted RBP13.35□□□□□ -0.27
PDE4C-208ENST00000595343 SSNA1O43805 119 aa13.34□□□□□ -0.27
PDE4C-208ENST00000595343 AP2S1P53680 142 aaPredicted RBP13.34□□□□□ -0.27
PDE4C-208ENST00000595343 PIGPP57054 158 aa13.34□□□□□ -0.27
PDE4C-208ENST00000595343 SURF2Q15527 256 aaPredicted RBP13.34□□□□□ -0.27
PDE4C-208ENST00000595343 LHFPL1Q86WI0 220 aa13.34□□□□□ -0.27
PDE4C-208ENST00000595343 TERB2Q8NHR7 220 aa13.34□□□□□ -0.27
PDE4C-208ENST00000595343 A0A0G2JRQ6 117 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 C3orf85A0A1B0GTC6 90 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 FAM90A26D6RGX4 464 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 H3BMM0 161 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 IGLC1P0CG04 106 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 ANXA7P20073 488 aaKnown RBP13.33□□□□□ -0.28
PDE4C-208ENST00000595343 SNRPD3P62318 126 aaKnown RBP13.33□□□□□ -0.28
PDE4C-208ENST00000595343 SCGB2B2Q4G0G5 96 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 OR11H7Q8NGC8 314 aa13.33□□□□□ -0.28
PDE4C-208ENST00000595343 RPS10-NUDT3A0A1W2PQS6 291 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 IFNA10P01566 189 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 SP6Q3SY56 376 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 NOXA1Q86UR1 476 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 ZNF431Q8TF32 576 aaPredicted RBP13.32□□□□□ -0.28
PDE4C-208ENST00000595343 Q8WTZ3 238 aa13.32□□□□□ -0.28
PDE4C-208ENST00000595343 IFNA21P01568 189 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 OR4E1P0C645 316 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 RND2P52198 227 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 YPEL3P61236 119 aaPredicted RBP13.31□□□□□ -0.28
PDE4C-208ENST00000595343 DHODHQ02127 395 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 USF2Q15853 346 aaPredicted RBP13.31□□□□□ -0.28
PDE4C-208ENST00000595343 PRSS54Q6PEW0 395 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 Q6ZR54 194 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 Q6ZRM9 215 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 RRNAD1Q96FB5 475 aaKnown RBP13.31□□□□□ -0.28
PDE4C-208ENST00000595343 HYLS1Q96M11 299 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 NEU1Q99519 415 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 SEC22CQ9BRL7 303 aa13.31□□□□□ -0.28
PDE4C-208ENST00000595343 SEPSECSQ9HD40 501 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms