RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 CACNG8Q8WXS5 425 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 RAX2Q96IS3 184 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 SLC25A33Q9BSK2 321 aa9.94□□□□□ -0.82
SCAF1-202ENST00000595242 ACTR3CQ9C0K3 210 aaPredicted RBP9.94□□□□□ -0.82
SCAF1-202ENST00000595242 CYB5BO43169 146 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 YIF1AO95070 293 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 IFNA1P01562 189 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 GPX4P36969 197 aaPredicted RBP9.93□□□□□ -0.82
SCAF1-202ENST00000595242 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
SCAF1-202ENST00000595242 ERHP84090 104 aaKnown RBP9.93□□□□□ -0.82
SCAF1-202ENST00000595242 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 MINOS1Q5TGZ0 78 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 LCN15Q6UWW0 184 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 MOB3BQ86TA1 216 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 CLRN3Q8NCR9 226 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 RNASEH2CQ8TDP1 164 aaKnown RBP9.93□□□□□ -0.82
SCAF1-202ENST00000595242 RITA1Q96K30 269 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 RARRES2Q99969 163 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 SRSF8Q9BRL6 282 aaKnown RBP9.93□□□□□ -0.82
SCAF1-202ENST00000595242 HINT2Q9BX68 163 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 TPSG1Q9NRR2 321 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 MINOS1-NBL1R4GNA1 71 aa9.93□□□□□ -0.82
SCAF1-202ENST00000595242 TNCP24821 2201 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 A0A1B0GV50 99 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 E7EUB6 86 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 NDUFA3O95167 84 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 NPBWR1P48145 328 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PRR20EP86478 221 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PRR20CP86479 221 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PRR20DP86480 221 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PRR20BP86481 221 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PRR20AP86496 221 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 WT1-ASQ06250 92 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 OR10W1Q8NGF6 305 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
SCAF1-202ENST00000595242 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
SCAF1-202ENST00000595242 IGHV3-72A0A0B4J1Y9 119 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 IGLC7A0M8Q6 106 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 RPL27AP46776 148 aaKnown RBP9.91□□□□□ -0.82
SCAF1-202ENST00000595242 SUB1P53999 127 aaKnown RBP eCLIP9.91□□□□□ -0.828e-6■■■□□ 15.4
SCAF1-202ENST00000595242 RAB31Q13636 194 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 HAGHQ16775 308 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 C10orf55Q5SWW7 151 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 PPP1R27Q86WC6 154 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 NPBQ8NG41 125 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 SLC25A22Q9H936 323 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 VAX2Q9UIW0 290 aa9.91□□□□□ -0.82
SCAF1-202ENST00000595242 FAM74A7A6NL05 159 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 CRYGCP07315 174 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 CNTFRP26992 372 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 BRS3P32247 399 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 PSMB3P49720 205 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 EBI3Q14213 229 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 DEFB136Q30KP8 78 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 MIC13Q5XKP0 118 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 CCDC144NLQ6NUI1 221 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 SLC16A13Q7RTY0 426 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 SLC35E1Q96K37 410 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 NOL4LQ96MY1 436 aaPredicted RBP9.9□□□□□ -0.82
SCAF1-202ENST00000595242 TM2D3Q9BRN9 247 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 GNG13Q9P2W3 67 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 METTL1Q9UBP6 276 aaKnown RBP9.9□□□□□ -0.82
SCAF1-202ENST00000595242 SLC45A2Q9UMX9 530 aa9.9□□□□□ -0.82
SCAF1-202ENST00000595242 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
SCAF1-202ENST00000595242 TEX22C9J3V5 150 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 LINC00869P0C866 280 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
SCAF1-202ENST00000595242 B2MP61769 119 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 SSBP2P81877 361 aaPredicted RBP9.89□□□□□ -0.83
SCAF1-202ENST00000595242 GAMTQ14353 236 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 RHEBQ15382 184 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 Q8N6K4 173 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 STPG3Q8N7X2 389 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 THAP8Q8NA92 274 aa9.89□□□□□ -0.83
SCAF1-202ENST00000595242 IGKV1OR2-108A0A075B7D4 117 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 ZFP92A6NM28 416 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 TMEM250H0YL14 139 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 M0QZK8 103 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 CORTO00230 105 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 NBR2O15453 112 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 MOSP00540 346 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 OR13C7P0DN81 318 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 HNF4GQ14541 408 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 TNXAQ16473 311 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 FAM90A2PQ658T7 463 aa9.88□□□□□ -0.83
SCAF1-202ENST00000595242 LCNL1Q6ZST4 164 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms