RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 HTR2BP41595 481 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 RND2P52198 227 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 DEFB1P60022 68 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 DHODHQ02127 395 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 PRSS54Q6PEW0 395 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 CLVS1Q8IUQ0 354 aaPredicted RBP6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 UBE2DNLQ8IWF7 75 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 OR4C16Q8NGL9 310 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 Q8WTZ3 238 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 RBPMSQ93062 196 aaKnown RBP6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 DIRAS2Q96HU8 199 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 GPR132Q9UNW8 380 aa6.91□□□□□ -1.3
NOTCH3-202ENST00000595045 TRAV30A0A087WSZ9 112 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 RPS10-NUDT3A0A1W2PQS6 291 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 FAM90A26D6RGX4 464 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 SCGB2A1O75556 95 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 AKAIN1P0CW23 69 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 OR10J1P30954 320 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 DHRS2Q13268 280 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 USF2Q15853 346 aaPredicted RBP6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 PSMG4Q5JS54 123 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 GDF5OSQ5U4N7 250 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 GSG1LQ6UXU4 331 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 FAM219AQ8IW50 185 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 SLC24A4Q8NFF2 622 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 OR51S1Q8NGJ8 323 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 OR52E5Q8NH55 327 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 NPIPB3Q92617 1050 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 ACY3Q96HD9 319 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 MRPS26Q9BYN8 205 aaKnown RBP6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 XCL2Q9UBD3 114 aa6.9□□□□□ -1.3
NOTCH3-202ENST00000595045 CRYM-AS1A6NIL9 109 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 B3GALNT1O75752 331 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 IL4P05112 153 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 HNRNPCP07910 306 aaKnown RBP eCLIP6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 AKR1C4P17516 323 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 ALDH3B2P48448 385 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 MRPS10P82664 201 aaKnown RBP6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 C2orf83Q53S99 150 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 ZNF709Q8N972 641 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 OR1S2Q8NGQ3 325 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 SMIM4Q8WVI0 70 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 NEU1Q99519 415 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 MCUBQ9NWR8 336 aa6.89□□□□□ -1.31
NOTCH3-202ENST00000595045 HELTA6NFD8 242 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 A6NHS1 94 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 BUB3O43684 328 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 SULT1A3P0DMM9 295 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 SULT1A4P0DMN0 295 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 SLC25A4P12235 298 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 HLA-DRB4P13762 266 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 NPY1RP25929 384 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 YPEL3P61236 119 aaPredicted RBP6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 SURF2Q15527 256 aaPredicted RBP6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 LYZL2Q7Z4W2 148 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 RNASEH2CQ8TDP1 164 aaKnown RBP6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 C17orf77Q96MU5 243 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 PRRT1Q99946 306 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 SEPSECSQ9HD40 501 aaKnown RBP6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 DKK2Q9UBU2 259 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 KCNIP3Q9Y2W7 256 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 TMEM56-RWDD3S4R434 201 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 HLA-DRB4X5D2U9 266 aa6.88□□□□□ -1.31
NOTCH3-202ENST00000595045 ANKRD20A5PA0PJZ0 165 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 SOCS3O14543 225 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 CTDSPLO15194 276 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 RD3LP0DJH9 198 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 EIF2B2P49770 351 aaKnown RBP6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 RNF212Q495C1 297 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 ETFRF1Q6IPR1 90 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 C1orf158Q8N1D5 194 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 OR51G1Q8NGK1 321 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 DYNC2LI1Q8TCX1 351 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 PBDC1Q9BVG4 233 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 WDR12Q9GZL7 423 aaKnown RBP6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 RBKSQ9H477 322 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 SCP2D1Q9UJQ7 156 aa6.87□□□□□ -1.31
NOTCH3-202ENST00000595045 FABP12A6NFH5 140 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 TOMM40O96008 361 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 PSG1P11464 419 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 AP2S1P53680 142 aaPredicted RBP6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 FXYD7P58549 80 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 NMSQ5H8A3 153 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 SIGLEC15Q6ZMC9 328 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 LGI3Q8N145 548 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 DTD1Q8TEA8 209 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 FAM210BQ96KR6 192 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 NRN1Q9NPD7 142 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 PAIP2BQ9ULR5 123 aaKnown RBP6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
NOTCH3-202ENST00000595045 IGKV1D-37A0A075B6S9 117 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 A0A0B4J2A0 478 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 ZFP92A6NM28 416 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 GSTZ1O43708 216 aaPredicted RBP6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 SPART-AS1P0CW21 52 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 IAPPP10997 89 aa6.85□□□□□ -1.31
NOTCH3-202ENST00000595045 TNFSF8P32971 234 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms