RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-208	ENST00000594387	CSTL1	Q9H114	145 aa		12.86	□□□□□ -0.35
IRF3-208	ENST00000594387	MPTX1	A8MV57	137 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	SNRPGP15	A8MWD9	76 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	DEFB135	Q30KP9	77 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	C16orf54	Q6UWD8	224 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	STH	Q8IWL8	128 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	PPP1R14B	Q96C90	147 aa		12.85	□□□□□ -0.35
IRF3-208	ENST00000594387	CFD	P00746	253 aa	Predicted RBP	12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	S100A7	P31151	101 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	BTC	P35070	178 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	ID3	Q02535	119 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	ZNF846	Q147U1	533 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	USF2	Q15853	346 aa	Predicted RBP	12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	MZT2B	Q6NZ67	158 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	C20orf85	Q9H1P6	137 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387	PSENEN	Q9NZ42	101 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387		U3KQE9	123 aa		12.84	□□□□□ -0.35
IRF3-208	ENST00000594387		K7EQG2	157 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	PLA2G10	O15496	165 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	SCGB1D2	O95969	90 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	TCRB	P04435	133 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	AKR1C1	Q04828	323 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	ZNF124	Q15973	351 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	IAH1	Q2TAA2	248 aa	Predicted RBP	12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	LEMD1	Q68G75	181 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	OR8G2P	Q6IF36	304 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	SIGLEC15	Q6ZMC9	328 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	RNF183	Q96D59	192 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	TRGV9	Q99603	122 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	GSKIP	Q9P0R6	139 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	STAB2	Q8WWQ8	2551 aa		12.83	□□□□□ -0.36
IRF3-208	ENST00000594387	TENM3	Q9P273	2699 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	TRAV6	A0A075B6T7	132 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	FAM240B	A0A1B0GVZ2	78 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387		H3BP45	60 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	LYZ	P61626	148 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	SNRPD3	P62318	126 aa	Known RBP	12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	POLR2G	P62487	172 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	ZNF90	Q03938	601 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	OR2F1	Q13607	317 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	TMEM217	Q8N7C4	229 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	MITD1	Q8WV92	249 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	FBXL17	Q9UF56	701 aa		12.82	□□□□□ -0.36
IRF3-208	ENST00000594387	BUB3	O43684	328 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	SSSCA1	O60232	199 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	ZNF688	P0C7X2	276 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	OR4D5	Q8NGN0	318 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	GATAD1	Q8WUU5	269 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	GLMP	Q8WWB7	406 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	SMIM8	Q96KF7	97 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	RAB40C	Q96S21	281 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	NRN1	Q9NPD7	142 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	AGRN	O00468	2067 aa		12.81	□□□□□ -0.36
IRF3-208	ENST00000594387	SMCO3	A2RU48	225 aa		12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	H2AFB2	P0C5Z0	115 aa		12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	THAP8	Q8NA92	274 aa		12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	BPIFC	Q8NFQ6	507 aa		12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	WDR12	Q9GZL7	423 aa	Known RBP	12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	NUDT15	Q9NV35	164 aa		12.8	□□□□□ -0.36
IRF3-208	ENST00000594387	IGKV1D-37	A0A075B6S9	117 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	FAM25E	A8MYX2	175 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387		L7N2F9	121 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	CA1	P00915	261 aa	Predicted RBP	12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	VAMP2	P63027	116 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	TMEM41B	Q5BJD5	291 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	C1orf194	Q5T5A4	169 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	DCANP1	Q8TF63	244 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	RARRES2	Q99969	163 aa		12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	SEPSECS	Q9HD40	501 aa	Known RBP	12.79	□□□□□ -0.36
IRF3-208	ENST00000594387	C5orf51	A6NDU8	294 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	ID1	P41134	155 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	PSMG4	Q5JS54	123 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	MORN3	Q6PF18	240 aa	Predicted RBP	12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	OR8I2	Q8N0Y5	310 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	FAM24B	Q8N5W8	94 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	OR10P1	Q8NGE3	313 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	ZNF431	Q8TF32	576 aa	Predicted RBP	12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	MGAT4C	Q9UBM8	478 aa		12.78	□□□□□ -0.36
IRF3-208	ENST00000594387	NBEAL2	Q6ZNJ1	2754 aa		12.77	□□□□□ -0.36
IRF3-208	ENST00000594387		A0A0J9YWU9	116 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	SPP1	P10451	314 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	TAS2R30	P59541	319 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	ACTL10	Q5JWF8	245 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	ACOT7L	Q6ZUV0	252 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	TMEM144	Q7Z5S9	345 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	S100A7A	Q86SG5	101 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	C12orf45	Q8N5I9	185 aa	Predicted RBP	12.77	□□□□□ -0.37
IRF3-208	ENST00000594387	ENKUR	Q8TC29	256 aa		12.77	□□□□□ -0.37
IRF3-208	ENST00000594387		A6NHS1	94 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	PRSS46	E5RG02	174 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	TSC22D2	O75157	780 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	IL5	P05113	134 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	PVALB	P20472	110 aa	Predicted RBP	12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	NUTF2	P61970	127 aa	Known RBP	12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	SAMD13	Q5VXD3	122 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	OR11H2	Q8NH07	326 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	TMEM147	Q9BVK8	224 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	NPVF	Q9HCQ7	196 aa		12.76	□□□□□ -0.37
IRF3-208	ENST00000594387	PTTG2	Q9NZH5	202 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms