RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NECAP1Q8NC96 275 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 OR1L4Q8NGR5 311 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 VN1R17PQ8TDU5 208 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 PFDN5Q99471 154 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 RNF2Q99496 336 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 ESM1Q9NQ30 184 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 C21orf62Q9NYP8 219 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 VAX2Q9UIW0 290 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
VRK3-207ENST00000594092 OR5G3P0C626 314 aa11.83□□□□□ -0.51
VRK3-207ENST00000594092 NPBWR1P48145 328 aa11.83□□□□□ -0.51
VRK3-207ENST00000594092 CFHR3Q02985 330 aa11.83□□□□□ -0.51
VRK3-207ENST00000594092 SVBPQ8N300 66 aa11.83□□□□□ -0.51
VRK3-207ENST00000594092 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.51
VRK3-207ENST00000594092 COX7A2P2O60397 106 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 BRI3O95415 125 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 IGKV1-17P01599 117 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 IGHV3-23P01764 117 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 ARL14EPLP0DKL9 152 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 TIGITQ495A1 244 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 SPATA31B1PQ5VZV4 182 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 Q71RC1 249 aaPredicted RBP11.83□□□□□ -0.52
VRK3-207ENST00000594092 MRPL32Q9BYC8 188 aaKnown RBP11.83□□□□□ -0.52
VRK3-207ENST00000594092 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
VRK3-207ENST00000594092 H3BUA1 57 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 FABP1P07148 127 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
VRK3-207ENST00000594092 TAS2R45P59539 299 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 Q56UQ5 140 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 TMEM37Q8WXS4 190 aa11.82□□□□□ -0.52
VRK3-207ENST00000594092 PSMB11A5LHX3 300 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 CLDN34H7C241 214 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 GNG7O60262 68 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 IGLV1-40P01703 118 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 TRGV3P03979 118 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 FCGR2BP31994 310 aaPredicted RBP11.81□□□□□ -0.52
VRK3-207ENST00000594092 C10orf113Q5VZT2 155 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 MIR17HGQ75NE6 70 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 Q8N2B8 174 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 TXN2Q99757 166 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 TECRQ9NZ01 308 aaKnown RBP11.81□□□□□ -0.52
VRK3-207ENST00000594092 DOK5Q9P104 306 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 TRAV30A0A087WSZ9 112 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 ELOA3CA0A087WX78 387 aaPredicted RBP11.81□□□□□ -0.52
VRK3-207ENST00000594092 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
VRK3-207ENST00000594092 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
VRK3-207ENST00000594092 OR2T8A6NH00 312 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 INAFM1C9JVW0 142 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 SCGB2A1O75556 95 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 PSG1P11464 419 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 GCHFRP30047 84 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 CEBPGP53567 150 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 TPPP2P59282 170 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 MEF2BQ02080 365 aaPredicted RBP11.8□□□□□ -0.52
VRK3-207ENST00000594092 ATP5G2Q06055 141 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 GUCA2BQ16661 112 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 ZNF329Q86UD4 541 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 ZNF418Q8TF45 676 aaPredicted RBP11.8□□□□□ -0.52
VRK3-207ENST00000594092 EEF1AKMT3Q96AZ1 226 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 KLK15Q9H2R5 256 aa11.8□□□□□ -0.52
VRK3-207ENST00000594092 PAGE4O60829 102 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 SCO1O75880 301 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 SNAPINO95295 136 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 IGHG4P01861 327 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 C8orf88P0DMB2 117 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 PF4V1P10720 104 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 ORM2P19652 201 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 PATE2Q6UY27 113 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 PQLC2Q6ZP29 291 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 CYB561D1Q8N8Q1 229 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 OR1B1Q8NGR6 318 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 CCDC140Q96MF4 163 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 CUBNO60494 3623 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 TRBV7-1A0A0A6YYK4 115 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 HYPMO75409 117 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 CTSGP08311 255 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 PLP1P60201 277 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
VRK3-207ENST00000594092 C10orf99Q6UWK7 81 aa11.79□□□□□ -0.52
VRK3-207ENST00000594092 OR7C2O60412 319 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 NDUFS6O75380 124 aaKnown RBP11.78□□□□□ -0.52
VRK3-207ENST00000594092 TOMM40O96008 361 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 RNASE1P07998 156 aaKnown RBP11.78□□□□□ -0.52
VRK3-207ENST00000594092 GPR183P32249 361 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 ADMP35318 185 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 RAB9AP51151 201 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 HILS1P60008 231 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 LINC00305Q7Z4B0 112 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 USMG5Q96IX5 58 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 CHRDL1Q9BU40 450 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 NKX6-2Q9C056 277 aaPredicted RBP11.78□□□□□ -0.52
VRK3-207ENST00000594092 TMEM167BQ9NRX6 74 aa11.78□□□□□ -0.52
VRK3-207ENST00000594092 SERTAD4Q9NUC0 356 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms