RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 TBR1Q16650 682 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 HCP5Q6MZN7 132 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 OR4A5Q8NH83 315 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 TMEM186Q96B77 213 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 TRAV9-2A0A087WT02 112 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 ENSAO43768 121 aaKnown RBP13.26□□□□□ -0.29
LIG1-206ENST00000594067 FSTL3O95633 263 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 THBDP07204 575 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 ORM2P19652 201 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 PTTG1IPP53801 180 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 UNQ5815/PRO19632Q6UWF5 114 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 OR8B3Q8NGG8 313 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 ST6GALNAC6Q969X2 333 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 OR8B2Q96RD0 313 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 TNFRSF19Q9NS68 423 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 C2orf70A6NJV1 201 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 APELAP0DMC3 54 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
LIG1-206ENST00000594067 Q56UQ5 140 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 LRRC10Q5BKY1 277 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 GRAMD2BQ96HH9 432 aa13.26□□□□□ -0.29
LIG1-206ENST00000594067 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
LIG1-206ENST00000594067 M0R2Z0 102 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 IGLL1P15814 213 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 THAP8Q8NA92 274 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 SSBP4Q9BWG4 385 aaPredicted RBP13.25□□□□□ -0.29
LIG1-206ENST00000594067 IGHV3-21A0A0B4J1V1 117 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 VWC2LB2RUY7 222 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 C22orf46C9J442 243 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 CORTO00230 105 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 VMA21Q3ZAQ7 101 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 OR4F17Q8NGA8 305 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 OR1B1Q8NGR6 318 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 RPH3ALQ9UNE2 315 aa13.25□□□□□ -0.29
LIG1-206ENST00000594067 OR2J3O76001 311 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 TOMM40O96008 361 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 LOXP28300 417 aaPredicted RBP13.24□□□□□ -0.29
LIG1-206ENST00000594067 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 ZNF841Q6ZN19 808 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 LINC00311Q8N616 119 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 COX11Q9Y6N1 276 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 PLXNB1O43157 2135 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 KLK10O43240 276 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 DLX1P56177 255 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 PRB3Q04118 309 aaPredicted RBP13.24□□□□□ -0.29
LIG1-206ENST00000594067 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
LIG1-206ENST00000594067 RNASE8Q8TDE3 154 aaKnown RBP13.24□□□□□ -0.29
LIG1-206ENST00000594067 SLC25A5P05141 298 aaKnown RBP13.23□□□□□ -0.29
LIG1-206ENST00000594067 UBE2V1Q13404 147 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 SPATA12Q7Z6I5 190 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 HIGD1CA8MV81 97 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 TNFRSF13BO14836 293 aaPredicted RBP13.23□□□□□ -0.29
LIG1-206ENST00000594067 CAMPP49913 170 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 UBE2G1P62253 170 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 FAM71F2Q6NXP2 309 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 RNASEKQ6P5S7 137 aaKnown RBP13.23□□□□□ -0.29
LIG1-206ENST00000594067 ZNF738Q8NE65 137 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 ZNF596Q8TC21 504 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 URB1-AS1Q96HZ7 61 aa13.23□□□□□ -0.29
LIG1-206ENST00000594067 PGPA6NDG6 321 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 H3BTX0 84 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 PRRG2O14669 202 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 DLX6P56179 175 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 LEMD1Q68G75 181 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 EPDR1Q9UM22 224 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 IGLC7A0M8Q6 106 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 CNTFRP26992 372 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 MYCNOSP40205 109 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 PERPQ96FX8 193 aa13.22□□□□□ -0.29
LIG1-206ENST00000594067 ADGRG4Q8IZF6 3080 aa13.21□□□□□ -0.29
LIG1-206ENST00000594067 MUC15Q8N387 334 aa13.21□□□□□ -0.29
LIG1-206ENST00000594067 A0A1B0GXF2 115 aa13.21□□□□□ -0.3
LIG1-206ENST00000594067 IGHV1-8P0DP01 117 aa13.21□□□□□ -0.3
LIG1-206ENST00000594067 RBX1P62877 108 aa13.21□□□□□ -0.3
LIG1-206ENST00000594067 TMEM155Q4W5P6 130 aa13.21□□□□□ -0.3
LIG1-206ENST00000594067 DCHS1Q96JQ0 3298 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 IGHV1-69-2A0A0G2JMI3 117 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 MC5RP33032 325 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 RNASE6Q93091 150 aaKnown RBP13.2□□□□□ -0.3
LIG1-206ENST00000594067 GSX1Q9H4S2 264 aaPredicted RBP13.2□□□□□ -0.3
LIG1-206ENST00000594067 DYNLRB1Q9NP97 96 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 AKAP13Q12802 2813 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 BSNQ9UPA5 3926 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 HIST1H1EP10412 219 aaKnown RBP13.2□□□□□ -0.3
LIG1-206ENST00000594067 ZNF137PP52743 207 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 CHRDL1Q9BU40 450 aa13.2□□□□□ -0.3
LIG1-206ENST00000594067 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 TCF24Q7RTU0 167 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 ATP5L2Q7Z4Y8 100 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 PCNX1Q96RV3 2341 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 CRYGCP07315 174 aa13.19□□□□□ -0.3
LIG1-206ENST00000594067 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms