RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 GTF3C1Q12789 2109 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 A0A0G2JLM5 398 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 GPX1P07203 203 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 RNASE2P10153 161 aaKnown RBP12.39□□□□□ -0.43
SYMPK-202ENST00000593504 IL15RAQ13261 267 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM155Q4W5P6 130 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 AGMATQ9BSE5 352 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 SPTAN1Q13813 2472 aaKnown RBP12.39□□□□□ -0.43
SYMPK-202ENST00000593504 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 TEX36Q5VZQ5 186 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 NIT1Q86X76 327 aa12.39□□□□□ -0.43
SYMPK-202ENST00000593504 YLPM1P49750 1951 aaKnown RBP12.39□□□□□ -0.43
SYMPK-202ENST00000593504 SMAD7O15105 426 aaKnown RBP12.38□□□□□ -0.43
SYMPK-202ENST00000593504 HERVK_113P61574 105 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 SCGB1D4Q6XE38 83 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 UTRNP46939 3433 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 LEPROTL1O95214 131 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 BTF3P20290 206 aaKnown RBP12.38□□□□□ -0.43
SYMPK-202ENST00000593504 MLANAQ16655 118 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 TCF23Q7RTU1 214 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 MYOZ3Q8TDC0 251 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 C9JQL5 133 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 FOXA3P55318 350 aaPredicted RBP12.38□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H1AQ02539 215 aaPredicted RBP12.38□□□□□ -0.43
SYMPK-202ENST00000593504 MINOS1Q5TGZ0 78 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 TEX38Q6PEX7 206 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 MINOS1-NBL1R4GNA1 71 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 CXCL1P09341 107 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 DERL1Q9BUN8 251 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
SYMPK-202ENST00000593504 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 ZNF134P52741 427 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 OOSP1A8MZH6 123 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 USF3Q68DE3 2245 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 A6NJY4 79 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 PSG1P11464 419 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 UQCRFS1P47985 274 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 PHLDA3Q9Y5J5 127 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM14BQ9NUH8 114 aa12.37□□□□□ -0.43
SYMPK-202ENST00000593504 C1QL4Q86Z23 238 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 F11RQ9Y624 299 aaKnown RBP12.36□□□□□ -0.43
SYMPK-202ENST00000593504 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 SLX1AQ9BQ83 275 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 PCNX3Q9H6A9 2034 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 HIGD1CA8MV81 97 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 LOXP28300 417 aaPredicted RBP12.36□□□□□ -0.43
SYMPK-202ENST00000593504 SRSF9Q13242 221 aaKnown RBP eCLIP12.36□□□□□ -0.43
SYMPK-202ENST00000593504 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
SYMPK-202ENST00000593504 TRGV9Q99603 122 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 ZGRF1Q86YA3 2104 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 MMP23AO75900 390 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 AREGP15514 252 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM170AQ8WVE7 144 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 MED13Q9UHV7 2174 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 AKAP6Q13023 2319 aa12.36□□□□□ -0.43
SYMPK-202ENST00000593504 H3BVH4 76 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BKO60814 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BJP06899 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BOP23527 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BBP33778 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BDP58876 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BCP62807 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST2H2BEQ16778 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.35□□□□□ -0.43
SYMPK-202ENST00000593504 ERASQ7Z444 233 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BHQ93079 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BNQ99877 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 HIST1H2BMQ99879 126 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 A0A1B0GWJ7 208 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 NMUP48645 174 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 ZNF833PQ6ZTB9 187 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 LINC01551Q86U37 167 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 MAP1LC3AQ9H492 121 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 CIARTQ8N365 385 aaPredicted RBP12.35□□□□□ -0.43
SYMPK-202ENST00000593504 LINC00527Q9UJ94 153 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 A0A1B0GUT8 65 aa12.35□□□□□ -0.43
SYMPK-202ENST00000593504 JOSD1Q15040 202 aaPredicted RBP12.35□□□□□ -0.43
SYMPK-202ENST00000593504 KIR3DL3Q8N743 410 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 CACNA1BQ00975 2339 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 MUC6Q6W4X9 2439 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 TRBV24-1A0A075B6N3 115 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 WISP2O76076 250 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 LINC00614P0C842 121 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 PRTN3P24158 256 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 ZNF841Q6ZN19 808 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 CEP192Q8TEP8 1941 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 MUC21A0A0G2JKD1 596 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 MUC21A0A140T8X8 626 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 FNDC10F2Z333 226 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 NUTF2P61970 127 aaKnown RBP12.34□□□□□ -0.43
SYMPK-202ENST00000593504 MUC21Q5SSG8 566 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 TMEM219Q86XT9 240 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 SPRNQ5BIV9 151 aa12.34□□□□□ -0.43
SYMPK-202ENST00000593504 SCRT1Q9BWW7 348 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms