RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SPART-AS1P0CW21 52 aa12.47□□□□□ -0.41
RETREG3-212ENST00000593251 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
RETREG3-212ENST00000593251 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
RETREG3-212ENST00000593251 TMEM229BQ8NBD8 167 aa12.47□□□□□ -0.41
RETREG3-212ENST00000593251 RBPMSQ93062 196 aaKnown RBP12.47□□□□□ -0.41
RETREG3-212ENST00000593251 RTBDNQ9BSG5 229 aaPredicted RBP12.47□□□□□ -0.41
RETREG3-212ENST00000593251 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
RETREG3-212ENST00000593251 GSTZ1O43708 216 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-212ENST00000593251 IFNA21P01568 189 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 PSG1P11464 419 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
RETREG3-212ENST00000593251 TAS2R19P59542 299 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 TMEM268Q5VZI3 342 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 ETFRF1Q6IPR1 90 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 STEAP1BQ6NZ63 245 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 LINC00052Q96N35 136 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 NEU1Q99519 415 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
RETREG3-212ENST00000593251 NAA60Q9H7X0 242 aa12.46□□□□□ -0.41
RETREG3-212ENST00000593251 C14orf166Q9Y224 244 aaKnown RBP12.46□□□□□ -0.41
RETREG3-212ENST00000593251 HTN3P15516 51 aa12.45□□□□□ -0.42
RETREG3-212ENST00000593251 C15orf40Q8WUR7 153 aa12.45□□□□□ -0.42
RETREG3-212ENST00000593251 AP3S1Q92572 193 aa12.45□□□□□ -0.42
RETREG3-212ENST00000593251 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
RETREG3-212ENST00000593251 NAA50Q9GZZ1 169 aaKnown RBP12.45□□□□□ -0.42
RETREG3-212ENST00000593251 FAM222AQ5U5X8 452 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 Q6ZR54 194 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 ZNF575Q86XF7 245 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 OR4B1Q8NGF8 309 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 RNF125Q96EQ8 232 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 SLC35B3Q9H1N7 401 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
RETREG3-212ENST00000593251 PRR13Q9NZ81 148 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 DKK2Q9UBU2 259 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 RFNGQ9Y644 331 aa12.44□□□□□ -0.42
RETREG3-212ENST00000593251 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 SMIM9A6NGZ8 99 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 GPR107Q5VW38 600 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 ZNF709Q8N972 641 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 NIPSNAP3BQ9BS92 247 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 KRTAP4-5Q9BYR2 181 aa12.43□□□□□ -0.42
RETREG3-212ENST00000593251 CRYM-AS1A6NIL9 109 aa12.42□□□□□ -0.42
RETREG3-212ENST00000593251 F6UB75 175 aa12.42□□□□□ -0.42
RETREG3-212ENST00000593251 ZNF182P17025 639 aaPredicted RBP12.42□□□□□ -0.42
RETREG3-212ENST00000593251 ZNF90Q03938 601 aa12.42□□□□□ -0.42
RETREG3-212ENST00000593251 FOXI2Q6ZQN5 318 aa12.42□□□□□ -0.42
RETREG3-212ENST00000593251 NOXA1Q86UR1 476 aa12.42□□□□□ -0.42
RETREG3-212ENST00000593251 GABARAPH6UMI1 98 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 GABARAPO95166 117 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 SULT1A3P0DMM9 295 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 SULT1A4P0DMN0 295 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 ID1P41134 155 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 KLF9Q13886 244 aaPredicted RBP12.41□□□□□ -0.42
RETREG3-212ENST00000593251 COQ8AQ8NI60 647 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 MIXL1Q9H2W2 232 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 CACFD1Q9UGQ2 172 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 GPR132Q9UNW8 380 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 TMEM56-RWDD3S4R434 201 aa12.41□□□□□ -0.42
RETREG3-212ENST00000593251 IGKV1D-37A0A075B6S9 117 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 DISC1C4P0D8 188 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 SOCS3O14543 225 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 PSMB3P49720 205 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 CTF1Q16619 201 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 OR4C16Q8NGL9 310 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 DTD1Q8TEA8 209 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 FAM210BQ96KR6 192 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
RETREG3-212ENST00000593251 RBKSQ9H477 322 aa12.4□□□□□ -0.42
RETREG3-212ENST00000593251 YTHDF2Q9Y5A9 579 aaKnown RBP12.4□□□□□ -0.42
RETREG3-212ENST00000593251 LOC102723971A0A1B0GUV8 181 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 NUP62P37198 522 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-212ENST00000593251 LYZP61626 148 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
RETREG3-212ENST00000593251 OR2F1Q13607 317 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 GAMTQ14353 236 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 SURF2Q15527 256 aaPredicted RBP12.39□□□□□ -0.43
RETREG3-212ENST00000593251 ZNF79Q15937 498 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 FAM78BQ5VT40 261 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 OR8G2PQ6IF36 304 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 TMEM88Q6PEY1 159 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 LGI3Q8N145 548 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 PFDN2Q9UHV9 154 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 GOLT1BQ9Y3E0 138 aa12.39□□□□□ -0.43
RETREG3-212ENST00000593251 TEX48A0A1B0GUV7 120 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 RGS5O15539 181 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 HBE1P02100 147 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 SUPT4H1P63272 117 aaKnown RBP12.38□□□□□ -0.43
RETREG3-212ENST00000593251 PSG9Q00887 426 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 RNF212Q495C1 297 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 CLUHP3Q96NS8 147 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 HSPB7Q9UBY9 170 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 U3KQ87 197 aa12.38□□□□□ -0.43
RETREG3-212ENST00000593251 HSPG2P98160 4391 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 AKAIN1P0CW23 69 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 MRPS10P82664 201 aaKnown RBP12.37□□□□□ -0.43
RETREG3-212ENST00000593251 OXA1LQ15070 435 aa12.37□□□□□ -0.43
RETREG3-212ENST00000593251 SOHLH1Q5JUK2 328 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms