RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 IGKV1D-39P04432 117 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 TPT1P13693 172 aaKnown RBP12.07□□□□□ -0.48
CIRBP-241ENST00000593048 VAMP2P63027 116 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 CIB3Q96Q77 187 aaPredicted RBP12.07□□□□□ -0.48
CIRBP-241ENST00000593048 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
CIRBP-241ENST00000593048 C11orf1Q9H5F2 150 aa12.07□□□□□ -0.48
CIRBP-241ENST00000593048 LSM5Q9Y4Y9 91 aaKnown RBP12.07□□□□□ -0.48
CIRBP-241ENST00000593048 IGHV3OR16-8A0A075B7F1 116 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 C15orf61A6NNL5 157 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 MFAP2P55001 183 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 ST8SIA2Q92186 375 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 CHRDL1Q9BU40 450 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 SLC25A32Q9H2D1 315 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 LYRM2Q9NU23 88 aaPredicted RBP12.06□□□□□ -0.48
CIRBP-241ENST00000593048 TMEM14BQ9NUH8 114 aa12.06□□□□□ -0.48
CIRBP-241ENST00000593048 K7EIM0 57 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 TSPAN4O14817 238 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 ZNF207O43670 478 aaKnown RBP12.05□□□□□ -0.48
CIRBP-241ENST00000593048 SCGB1D2O95969 90 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 BAP18Q8IXM2 172 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 OR1P1Q8NH06 330 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 MISP3Q96FF7 219 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 SMIM8Q96KF7 97 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 ZNF471Q9BX82 626 aaPredicted RBP12.05□□□□□ -0.48
CIRBP-241ENST00000593048 HSPB7Q9UBY9 170 aa12.05□□□□□ -0.48
CIRBP-241ENST00000593048 RCL1Q9Y2P8 373 aaKnown RBP12.05□□□□□ -0.48
CIRBP-241ENST00000593048 BORCS7-ASMTA0A0B4J1R7 106 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 NUPL2O15504 423 aaKnown RBP12.04□□□□□ -0.48
CIRBP-241ENST00000593048 SYNGR2O43760 224 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 YIF1AO95070 293 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 APOC4P55056 127 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 RELQ04864 619 aaPredicted RBP12.04□□□□□ -0.48
CIRBP-241ENST00000593048 ZNF266Q14584 549 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 MED9Q9NWA0 146 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
CIRBP-241ENST00000593048 OR4C46A6NHA9 309 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 K7EMT4 169 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 ADMP35318 185 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 MFAP4P55083 255 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 ATP5IP56385 69 aaPredicted RBP12.03□□□□□ -0.48
CIRBP-241ENST00000593048 ERHP84090 104 aaKnown RBP12.03□□□□□ -0.48
CIRBP-241ENST00000593048 STX12Q86Y82 276 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 OVOL2Q9BRP0 275 aa12.03□□□□□ -0.48
CIRBP-241ENST00000593048 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.48
CIRBP-241ENST00000593048 F8W735 103 aaPredicted RBP12.02□□□□□ -0.49
CIRBP-241ENST00000593048 DFFBO76075 338 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 CTSGP08311 255 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 S100A1P23297 94 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 HTR2BP41595 481 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 HSPE1P61604 102 aaKnown RBP12.02□□□□□ -0.49
CIRBP-241ENST00000593048 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.49
CIRBP-241ENST00000593048 RPP30P78346 268 aaKnown RBP12.02□□□□□ -0.49
CIRBP-241ENST00000593048 PRCDQ00LT1 54 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 TNFRSF9Q07011 255 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 PINX1Q96BK5 328 aaKnown RBP12.02□□□□□ -0.49
CIRBP-241ENST00000593048 TXN2Q99757 166 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 CYTL1Q9NRR1 136 aa12.02□□□□□ -0.49
CIRBP-241ENST00000593048 A0A0G2JRQ6 117 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 LINC00862A6NCI5 91 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 GNG7O60262 68 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 MT-CO2P00403 227 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 SPCS3P61009 180 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 Q6ZRM9 215 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 TMEM252Q8N6L7 170 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 ARV1Q9H2C2 271 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 SMPXQ9UHP9 88 aa12.01□□□□□ -0.49
CIRBP-241ENST00000593048 I3L2K1 104 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 SPRY2O43597 315 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 SSSCA1O60232 199 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 CFDP00746 253 aaPredicted RBP12□□□□□ -0.49
CIRBP-241ENST00000593048 IGHV3-48P01763 117 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 SNCAP37840 140 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 SULT1A1P50225 295 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 HBG1P69891 147 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 HBG2P69892 147 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 EWSR1Q01844 656 aaKnown RBP eCLIP12□□□□□ -0.49
CIRBP-241ENST00000593048 ATP6V1FQ16864 119 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 Q6ZWC4 215 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 STPG3Q8N7X2 389 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 ZNF114Q8NC26 417 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 TMEM116Q8NCL8 245 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 RHPN1-AS1Q9BWJ2 59 aa12□□□□□ -0.49
CIRBP-241ENST00000593048 IGKV3-7A0A075B6H7 116 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 IGHV3-49A0A0A0MS15 119 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 IGHV7-4-1A0A0J9YVY3 117 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 UBE2CO00762 179 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 IFNA17P01571 189 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 SEC11BP0C7V7 166 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 RPL35AP18077 110 aaKnown RBP11.99□□□□□ -0.49
CIRBP-241ENST00000593048 FCGR2BP31994 310 aaPredicted RBP11.99□□□□□ -0.49
CIRBP-241ENST00000593048 BMI1P35226 326 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 TFPI2P48307 235 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 RAB5CP51148 216 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 CAV2P51636 162 aa11.99□□□□□ -0.49
CIRBP-241ENST00000593048 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms