RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 TRAV10A0A0B4J240 114 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 FAM90A26D6RGX4 464 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 IFNA10P01566 189 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 ANXA3P12429 323 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 C4BPBP20851 252 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 GPX4P36969 197 aaPredicted RBP13.66□□□□□ -0.22
CCDC43-205ENST00000592333 TMBIM6P55061 237 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 SMCO1Q147U7 214 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 PSMG4Q5JS54 123 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 OR8G2PQ6IF36 304 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 SIGLEC15Q6ZMC9 328 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 DYNC2LI1Q8TCX1 351 aa13.66□□□□□ -0.22
CCDC43-205ENST00000592333 IGLL5B9A064 214 aa13.65□□□□□ -0.22
CCDC43-205ENST00000592333 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
CCDC43-205ENST00000592333 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
CCDC43-205ENST00000592333 LGI3Q8N145 548 aa13.65□□□□□ -0.22
CCDC43-205ENST00000592333 DTD1Q8TEA8 209 aa13.65□□□□□ -0.22
CCDC43-205ENST00000592333 DUXBA0A1W2PPF3 345 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 NXPH3O95157 252 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 FABP1P07148 127 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 PSG1P11464 419 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 NKX2-1P43699 371 aaPredicted RBP13.64□□□□□ -0.23
CCDC43-205ENST00000592333 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 RNF125Q96EQ8 232 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 ACY3Q96HD9 319 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 CLUHP3Q96NS8 147 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 RNF126Q9BV68 326 aa13.64□□□□□ -0.23
CCDC43-205ENST00000592333 AGRNO00468 2067 aa13.63□□□□□ -0.23
CCDC43-205ENST00000592333 ELOA3CA0A087WX78 387 aaPredicted RBP13.63□□□□□ -0.23
CCDC43-205ENST00000592333 H3BMM0 161 aa13.63□□□□□ -0.23
CCDC43-205ENST00000592333 NEU1Q99519 415 aa13.63□□□□□ -0.23
CCDC43-205ENST00000592333 SOSTQ9BQB4 213 aa13.63□□□□□ -0.23
CCDC43-205ENST00000592333 SMIM9A6NGZ8 99 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 HLA-DRB4P13762 266 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 AKR1C4P17516 323 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 FAUP35544 74 aaKnown RBP13.62□□□□□ -0.23
CCDC43-205ENST00000592333 SUPT4H1P63272 117 aaKnown RBP13.62□□□□□ -0.23
CCDC43-205ENST00000592333 SAMD13Q5VXD3 122 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 SPATA31B1PQ5VZV4 182 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 DEDD2Q8WXF8 326 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 HLA-DRB4X5D2U9 266 aa13.62□□□□□ -0.23
CCDC43-205ENST00000592333 SLC25A6P12236 298 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 ID1P41134 155 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 PRR20EP86478 221 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 PRR20CP86479 221 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 PRR20DP86480 221 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 PRR20BP86481 221 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 PRR20AP86496 221 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 Q6ZTC4 211 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 LYZL2Q7Z4W2 148 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 RBKSQ9H477 322 aa13.61□□□□□ -0.23
CCDC43-205ENST00000592333 IGHV4-4A0A075B6R2 117 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 SNRPGP15A8MWD9 76 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 CFDP00746 253 aaPredicted RBP13.6□□□□□ -0.23
CCDC43-205ENST00000592333 GAMTQ14353 236 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 TMEM128Q5BJH2 165 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 SLC35E1Q96K37 410 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 SLIRPQ9GZT3 109 aaKnown RBP13.6□□□□□ -0.23
CCDC43-205ENST00000592333 MCUBQ9NWR8 336 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 CLEC5AQ9NY25 188 aa13.6□□□□□ -0.23
CCDC43-205ENST00000592333 FABP12A6NFH5 140 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 PITX3O75364 302 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 AMBPP02760 352 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 PSMB3P49720 205 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 AP3S2P59780 193 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 ZNF705AQ6ZN79 300 aaPredicted RBP13.59□□□□□ -0.23
CCDC43-205ENST00000592333 LRTM2Q8N967 370 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
CCDC43-205ENST00000592333 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 TNFSF8P32971 234 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 RAB11AP62491 216 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 FOXI2Q6ZQN5 318 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 TRGV9Q99603 122 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 SAV1Q9H4B6 383 aaPredicted RBP13.58□□□□□ -0.24
CCDC43-205ENST00000592333 XCL2Q9UBD3 114 aa13.58□□□□□ -0.24
CCDC43-205ENST00000592333 VPS13DQ5THJ4 4388 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 IGKV1D-37A0A075B6S9 117 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 DEFB131BA0A096LNP1 70 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 ZNF705FA8MVS1 300 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 NOL3O60936 208 aaKnown RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 MED6O75586 246 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 ZNF705DP0CH99 300 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 ZNF705BP0CI00 300 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 RPP30P78346 268 aaKnown RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 C12orf74Q32Q52 190 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 LINC00336Q6ZUF6 198 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 CIB3Q96Q77 187 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 SLC25A21Q9BQT8 299 aaPredicted RBP13.57□□□□□ -0.24
CCDC43-205ENST00000592333 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 PRR13Q9NZ81 148 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
CCDC43-205ENST00000592333 DNAH10Q8IVF4 4471 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 ISLRO14498 428 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 P0DMU3 169 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 FAM231AP0DMU4 169 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 FAM231CP0DMU5 169 aa13.56□□□□□ -0.24
CCDC43-205ENST00000592333 S100A7P31151 101 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms