RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ERVFC1-1P60608 527 aa12.49□□□□□ -0.41
MBD1-227ENST00000592060 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
MBD1-227ENST00000592060 Q8N6K4 173 aa12.49□□□□□ -0.41
MBD1-227ENST00000592060 FABP4P15090 132 aa12.48□□□□□ -0.41
MBD1-227ENST00000592060 YPEL3P61236 119 aaPredicted RBP12.48□□□□□ -0.41
MBD1-227ENST00000592060 RPEL1Q2QD12 228 aa12.48□□□□□ -0.41
MBD1-227ENST00000592060 MINOS1Q5TGZ0 78 aa12.48□□□□□ -0.41
MBD1-227ENST00000592060 TRAPPC1Q9Y5R8 145 aa12.48□□□□□ -0.41
MBD1-227ENST00000592060 MINOS1-NBL1R4GNA1 71 aa12.48□□□□□ -0.41
MBD1-227ENST00000592060 ISLRO14498 428 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 FXYD3Q14802 87 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 CCDC144NLQ6NUI1 221 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 RNASE7Q9H1E1 156 aaKnown RBP12.47□□□□□ -0.41
MBD1-227ENST00000592060 GSN-AS1Q9NRJ2 163 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 IGHV2-70DA0A0C4DH43 119 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 IGKV1-17P01599 117 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 PSG1P11464 419 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
MBD1-227ENST00000592060 EBI3Q14213 229 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 LINC00479Q96M42 142 aa12.47□□□□□ -0.41
MBD1-227ENST00000592060 HES1Q14469 280 aa12.46□□□□□ -0.41
MBD1-227ENST00000592060 OR1L6Q8NGR2 347 aa12.46□□□□□ -0.41
MBD1-227ENST00000592060 FAM103A1Q9BTL3 118 aaKnown RBP12.46□□□□□ -0.41
MBD1-227ENST00000592060 HIGD1AQ9Y241 93 aa12.46□□□□□ -0.41
MBD1-227ENST00000592060 AMBPP02760 352 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 FABP1P07148 127 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 LYZP61626 148 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 CDPF1Q6NVV7 123 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 PACRGQ96M98 296 aaPredicted RBP12.45□□□□□ -0.42
MBD1-227ENST00000592060 SNRPCP09234 159 aaKnown RBP12.45□□□□□ -0.42
MBD1-227ENST00000592060 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 ADMP35318 185 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 GNG5P63218 68 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 NDPQ00604 133 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 BLNKQ8WV28 456 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 RASL11BQ9BPW5 248 aa12.45□□□□□ -0.42
MBD1-227ENST00000592060 ITPR1Q14643 2758 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 NPIPB5A8MRT5 1133 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 OVOL3O00110 214 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 MGST1P10620 155 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 HIST1H1BP16401 226 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 LMO4P61968 165 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 RANP62826 216 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 IBA57Q5T440 356 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 LEMD1Q68G75 181 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 OR8I2Q8N0Y5 310 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 TBX15Q96SF7 602 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 MRPL27Q9P0M9 148 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 EPDR1Q9UM22 224 aa12.44□□□□□ -0.42
MBD1-227ENST00000592060 SPTBN1Q01082 2364 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 SETXQ7Z333 2677 aaKnown RBP12.44□□□□□ -0.42
MBD1-227ENST00000592060 TRAV34A0A0B4J273 112 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 CBLN1P23435 193 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 CX3CL1P78423 397 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 TMEM183BQ1AE95 376 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 NHLRC2Q8NBF2 726 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 ARPC1AQ92747 370 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 AJUBAQ96IF1 538 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
MBD1-227ENST00000592060 FANCD2OSQ96PS1 177 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 SLC25A39Q9BZJ4 359 aaPredicted RBP12.43□□□□□ -0.42
MBD1-227ENST00000592060 TMEM14CQ9P0S9 112 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 TBL2Q9Y4P3 447 aaKnown RBP12.43□□□□□ -0.42
MBD1-227ENST00000592060 IGLV11-55A0A075B6I3 123 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 SLC25A5P05141 298 aaKnown RBP12.43□□□□□ -0.42
MBD1-227ENST00000592060 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 BPESC1Q9GZL8 116 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 C7orf69Q9H7B7 122 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 KLF12Q9Y4X4 402 aa12.43□□□□□ -0.42
MBD1-227ENST00000592060 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 PGPA6NDG6 321 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 TOX4O94842 621 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 FRMD6-AS1P0C7T7 363 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 RD3LP0DJH9 198 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 KLF17Q5JT82 389 aaPredicted RBP12.42□□□□□ -0.42
MBD1-227ENST00000592060 ZNF600Q6ZNG1 722 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 BAGE2Q86Y30 109 aa12.42□□□□□ -0.42
MBD1-227ENST00000592060 TOMM40O96008 361 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 TMEM11P17152 192 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 UBE2E1P51965 193 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 TTC9CQ8N5M4 171 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 MBD6Q96DN6 1003 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 ZNF48Q96MX3 618 aaPredicted RBP12.41□□□□□ -0.42
MBD1-227ENST00000592060 Q9H3A6 140 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 TRBV9A0A0B4J1U6 114 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 H3BRN7 92 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 ATG101Q9BSB4 218 aa12.41□□□□□ -0.42
MBD1-227ENST00000592060 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
MBD1-227ENST00000592060 NCBP2LA6PVI3 153 aaKnown RBP12.4□□□□□ -0.42
MBD1-227ENST00000592060 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 H3BTX0 84 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 IER3P46695 156 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 GBGT1Q8N5D6 347 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 SHANK2-AS3Q9BTD1 123 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 ZNF586Q9NXT0 402 aa12.4□□□□□ -0.42
MBD1-227ENST00000592060 A0A1B0GUS0 222 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms