RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 VSIRQ9H7M9 311 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 PSENENQ9NZ42 101 aa10.38□□□□□ -0.75
CLIP3-205ENST00000592017 C5orf51A6NDU8 294 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
CLIP3-205ENST00000592017 HNRNPCP07910 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
CLIP3-205ENST00000592017 PSG1P11464 419 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 CRYBB3P26998 211 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 P2RY1P47900 373 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 PAFAH1B2P68402 229 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 USF2Q15853 346 aaPredicted RBP10.37□□□□□ -0.75
CLIP3-205ENST00000592017 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 FAM90A2PQ658T7 463 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 PBDC1Q9BVG4 233 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 RETNQ9HD89 108 aa10.37□□□□□ -0.75
CLIP3-205ENST00000592017 SMCO3A2RU48 225 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 CD5P06127 495 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 LYL1P12980 280 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 ZNF90Q03938 601 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 AKR1C1Q04828 323 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 OR2F1Q13607 317 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 OR8G2PQ6IF36 304 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 ACOT7LQ6ZUV0 252 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 STXBP6Q8NFX7 210 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 OR51G1Q8NGK1 321 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 GGTLC1Q9BX51 225 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 MS4A6AQ9H2W1 248 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 RABAC1Q9UI14 185 aa10.36□□□□□ -0.75
CLIP3-205ENST00000592017 RCL1Q9Y2P8 373 aaKnown RBP10.36□□□□□ -0.75
CLIP3-205ENST00000592017 IGKV1D-37A0A075B6S9 117 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
CLIP3-205ENST00000592017 PRSS46E5RG02 174 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
CLIP3-205ENST00000592017 FABP1P07148 127 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 DEFA1P59665 94 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 DEFA3P59666 94 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 LYZP61626 148 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 NRARPQ7Z6K4 114 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 APRG1Q8IVJ8 170 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 SMIM8Q96KF7 97 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 FAM110AQ9BQ89 295 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 LSM5Q9Y4Y9 91 aaKnown RBP10.35□□□□□ -0.75
CLIP3-205ENST00000592017 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
CLIP3-205ENST00000592017 L7N2F9 121 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 CCNKO75909 580 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 METTL15P1P0C7V9 234 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 RRAS2P62070 204 aaPredicted RBP10.34□□□□□ -0.75
CLIP3-205ENST00000592017 VAMP2P63027 116 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 ZNF124Q15973 351 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 ZFAND6Q6FIF0 208 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 GSG1LQ6UXU4 331 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 RAB40CQ96S21 281 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 MAP6D1Q9H9H5 199 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 GPN1Q9HCN4 374 aaPredicted RBP10.34□□□□□ -0.75
CLIP3-205ENST00000592017 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
CLIP3-205ENST00000592017 IGKV1OR2-108A0A075B7D4 117 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 IL5P05113 134 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 RPL35AP18077 110 aaKnown RBP10.33□□□□□ -0.76
CLIP3-205ENST00000592017 EIF2B2P49770 351 aaKnown RBP10.33□□□□□ -0.76
CLIP3-205ENST00000592017 PAX9P55771 341 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 S100A10P60903 97 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 THAP8Q8NA92 274 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 TRGV9Q99603 122 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 U3KQE9 123 aa10.33□□□□□ -0.76
CLIP3-205ENST00000592017 SNRPGP15A8MWD9 76 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 INMT-MINDY4F8WBC2 141 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 K7EPK0 472 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 TSC22D2O75157 780 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 BCAP31P51572 246 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 DEFB131AP59861 70 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 C16orf54Q6UWD8 224 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 TMEM14EPQ6UXP3 125 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 FAM24BQ8N5W8 94 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 OR10P1Q8NGE3 313 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 GLMPQ8WWB7 406 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 PPP1R14BQ96C90 147 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 C2orf50Q96LR7 162 aa10.32□□□□□ -0.76
CLIP3-205ENST00000592017 TRAV2A0A0B4J234 112 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 C7orf66A4D0T2 115 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 HELTA6NFD8 242 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 PMS2P5A8MQ11 134 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 GOSR2O14653 212 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
CLIP3-205ENST00000592017 CAV2P51636 162 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 APOC4P55056 127 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 CMC4P56277 68 aaPredicted RBP10.31□□□□□ -0.76
CLIP3-205ENST00000592017 TAS2R30P59541 319 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 LEMD1Q68G75 181 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 SIGLEC15Q6ZMC9 328 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 MGAT4CQ9UBM8 478 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 PFDN2Q9UHV9 154 aa10.31□□□□□ -0.76
CLIP3-205ENST00000592017 PLECQ15149 4684 aaKnown RBP10.31□□□□□ -0.76
CLIP3-205ENST00000592017 K7EQG2 157 aa10.3□□□□□ -0.76
CLIP3-205ENST00000592017 BUB3O43684 328 aa10.3□□□□□ -0.76
CLIP3-205ENST00000592017 PRAF2O60831 178 aa10.3□□□□□ -0.76
CLIP3-205ENST00000592017 ZNF688P0C7X2 276 aa10.3□□□□□ -0.76
CLIP3-205ENST00000592017 GATA2P23769 480 aaPredicted RBP10.3□□□□□ -0.76
CLIP3-205ENST00000592017 DLK1P80370 383 aa10.3□□□□□ -0.76
CLIP3-205ENST00000592017 TMEM144Q7Z5S9 345 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms